RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KLHL13Q9P2N7 655 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 RPS6KB2Q9UBS0 482 aa15.17■□□□□ 0.02
VPS52-215ENST00000464425 DCHS2Q6V1P9 2916 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 M0R3H8 397 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 TPST2O60704 377 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 CYTIPO60759 359 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 STAMBPO95630 424 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 YES1P07947 543 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 IMPDH2P12268 514 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 POU2F1P14859 743 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 CD79BP40259 229 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 KRTAP10-9P60411 292 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 SORDQ00796 357 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 FKBP9P1Q75LS8 142 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 VTCN1Q7Z7D3 282 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 CARM1Q86X55 608 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 OR4D11Q8NGI4 311 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 GEMIN6Q8WXD5 167 aaKnown RBP15.16■□□□□ 0.02
VPS52-215ENST00000464425 ZHX1-C8orf76Q96EF9 292 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 HSH2DQ96JZ2 352 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 PSD2Q9BQI7 771 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 POLR2J2Q9GZM3 115 aaKnown RBP15.16■□□□□ 0.02
VPS52-215ENST00000464425 POLR2J3Q9H1A7 115 aaKnown RBP15.16■□□□□ 0.02
VPS52-215ENST00000464425 KLHL9Q9P2J3 617 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 ING1Q9UK53 422 aaPredicted RBP15.16■□□□□ 0.02
VPS52-215ENST00000464425 TRAPPC4Q9Y296 219 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 MAST4O15021 2626 aa15.16■□□□□ 0.02
VPS52-215ENST00000464425 A0A1B0GWA3 101 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ZNF814B7Z6K7 855 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 FPR1P21462 350 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 SLC35A1P78382 337 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 NPTX1Q15818 432 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 IFI44LQ53G44 452 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ULK3Q6PHR2 472 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ATG4DQ86TL0 474 aaPredicted RBP15.15■□□□□ 0.02
VPS52-215ENST00000464425 CCDC103Q8IW40 242 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 RNF217Q8TC41 542 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 FAM222BQ8WU58 562 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 DNAJA4Q8WW22 397 aaPredicted RBP15.15■□□□□ 0.02
VPS52-215ENST00000464425 CCDC124Q96CT7 223 aaKnown RBP15.15■□□□□ 0.02
VPS52-215ENST00000464425 PYURFQ96I23 114 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ZNF300Q96RE9 604 aaPredicted RBP15.15■□□□□ 0.02
VPS52-215ENST00000464425 MCHR1Q99705 422 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 POTEKPQ9BYX7 375 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 KLHL4Q9C0H6 718 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 C12orf10Q9HB07 376 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 TMEM27Q9HBJ8 222 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 MCCC2Q9HCC0 563 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 GP6Q9HCN6 339 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ELOVL5Q9NYP7 299 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 SLC7A8Q9UHI5 535 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 POMPQ9Y244 141 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ANKHD1Q8IWZ3 2542 aaKnown RBP15.15■□□□□ 0.02
VPS52-215ENST00000464425 FBN2P35556 2912 aa15.15■□□□□ 0.02
VPS52-215ENST00000464425 ELOA3DA6NLF2 546 aaPredicted RBP15.14■□□□□ 0.01
VPS52-215ENST00000464425 A8MVM7 634 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 RAMP1O60894 148 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 ATP6V1B2P21281 511 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 IDUAP35475 653 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 OR1E2P47887 323 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 OR1Q1Q15612 314 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 OR7A5Q15622 319 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 ELOA3BQ3SY89 546 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 SWT1Q5T5J6 900 aaKnown RBP15.14■□□□□ 0.01
VPS52-215ENST00000464425 ZNF613Q6PF04 617 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 CYP2R1Q6VVX0 501 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 STK32CQ86UX6 486 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 RBM45Q8IUH3 476 aaKnown RBP15.14■□□□□ 0.01
VPS52-215ENST00000464425 ELOA3Q8NG57 546 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 VANGL1Q8TAA9 524 aaPredicted RBP15.14■□□□□ 0.01
VPS52-215ENST00000464425 LRGUKQ96M69 825 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 TRIM15Q9C019 465 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 BCO1Q9HAY6 547 aa15.14■□□□□ 0.01
VPS52-215ENST00000464425 TCRBV5S2A0A599 114 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 LIPT2A6NK58 231 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 AQP12BA6NM10 295 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 C16orf97H3BN30 126 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 EIF1BO60739 113 aaKnown RBP15.13■□□□□ 0.01
VPS52-215ENST00000464425 SEMG1P04279 462 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 IFNW1P05000 195 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 GPIP06744 558 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 EPXP11678 715 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 TNFRSF1BP20333 461 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 UGT2B10P36537 528 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 H3F3AP84243 136 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 ZSCAN26Q16670 478 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 ALG10BQ5I7T1 473 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 ENTPD8Q5MY95 495 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 C1orf140Q5VVS0 124 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 ANKRD34AQ69YU3 496 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 ABLIM2Q6H8Q1 611 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 TFAP2EQ6VUC0 442 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.13■□□□□ 0.01
VPS52-215ENST00000464425 TMEM200AQ86VY9 491 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 AQP12AQ8IXF9 295 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 SLC38A4Q969I6 547 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 TACO1Q9BSH4 297 aaKnown RBP15.13■□□□□ 0.01
VPS52-215ENST00000464425 NAA11Q9BSU3 229 aaPredicted RBP15.13■□□□□ 0.01
VPS52-215ENST00000464425 TAPBPLQ9BX59 468 aa15.13■□□□□ 0.01
VPS52-215ENST00000464425 AMBRA1Q9C0C7 1298 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms