RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SERPINF1P36955 418 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 RPL14P50914 215 aaKnown RBP19.71■□□□□ 0.75
USP4-208ENST00000464168 SRSF2Q01130 221 aaKnown RBP19.71■□□□□ 0.75
USP4-208ENST00000464168 OR7A5Q15622 319 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 FAM120AOSQ5T036 256 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 FAM166AQ6J272 317 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 SORT1Q99523 831 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 PIMREGQ9BSJ6 248 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 C19orf24Q9BVV8 132 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 PIF1Q9H611 641 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 CHODLQ9H9P2 273 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 OBP2BQ9NPH6 170 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 RLIMQ9NVW2 624 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 KCNS2Q9ULS6 477 aa19.71■□□□□ 0.75
USP4-208ENST00000464168 IGHV4-61A0A0C4DH41 118 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 DBIP07108 87 aaKnown RBP19.7■□□□□ 0.74
USP4-208ENST00000464168 LBPP18428 481 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 CDKN2CP42773 168 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 P2RY4P51582 365 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 SNRPD2P62316 118 aaKnown RBP19.7■□□□□ 0.74
USP4-208ENST00000464168 LGALS3BPQ08380 585 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 GNA13Q14344 377 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 GSTA3Q16772 222 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 TBRG1Q3YBR2 411 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 COX20Q5RI15 118 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 GPAT4Q86UL3 456 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 SLC38A2Q96QD8 506 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 NUF2Q9BZD4 464 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 CA10Q9NS85 328 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 TMEM45AQ9NWC5 275 aa19.7■□□□□ 0.74
USP4-208ENST00000464168 LOC390937A0A1W2PQ73 354 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 LGI1O95970 557 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 NR2F1P10589 423 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 APEHP13798 732 aaKnown RBP19.69■□□□□ 0.74
USP4-208ENST00000464168 UQCRBP14927 111 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 CXCR1P25024 350 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 NME5P56597 212 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 UFM1P61960 85 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 VSNL1P62760 191 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 TXNL4AP83876 142 aaKnown RBP19.69■□□□□ 0.74
USP4-208ENST00000464168 MAPK11Q15759 364 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 CARTPTQ16568 116 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 ABHD12BQ7Z5M8 362 aaPredicted RBP19.69■□□□□ 0.74
USP4-208ENST00000464168 ZNF440Q8IYI8 595 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 LRRC34Q8IZ02 419 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 TRIML2Q8N7C3 387 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 ANKS4BQ8N8V4 417 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 OR1K1Q8NGR3 316 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 C3orf49Q96BT1 292 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 PANX1Q96RD7 426 aa19.69■□□□□ 0.74
USP4-208ENST00000464168 VRK1Q99986 396 aaPredicted RBP19.69■□□□□ 0.74
USP4-208ENST00000464168 CDHR4A6H8M9 788 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 BIRC5O15392 142 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 KRT33AO76009 404 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 GSNP06396 782 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 GKN3PP0CG01 181 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 IL12AP29459 219 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 ACAA2P42765 397 aaKnown RBP19.68■□□□□ 0.74
USP4-208ENST00000464168 SLC1A6P48664 564 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 ANXA11P50995 505 aaKnown RBP19.68■□□□□ 0.74
USP4-208ENST00000464168 BNIP2Q12982 314 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 ADIPOQQ15848 244 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 TMEM225Q6GV28 225 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 ZNF621Q6ZSS3 439 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 CREB3L2Q70SY1 520 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 PNPT1Q8TCS8 783 aaKnown RBP19.68■□□□□ 0.74
USP4-208ENST00000464168 BCL2L2Q92843 193 aaPredicted RBP19.68■□□□□ 0.74
USP4-208ENST00000464168 KATNB1Q9BVA0 655 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 TMEM109Q9BVC6 243 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 ADPRHL2Q9NX46 363 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 HAO1Q9UJM8 370 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 PRDM4Q9UKN5 801 aa19.68■□□□□ 0.74
USP4-208ENST00000464168 CRYAAP02489 173 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 ALDOCP09972 364 aaKnown RBP19.67■□□□□ 0.74
USP4-208ENST00000464168 OR4A8P0C604 315 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 SELENOPP49908 381 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 OGFOD2Q6N063 350 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 ANKRD16Q6P6B7 361 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 LINGO2Q7L985 606 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 SLC46A3Q7Z3Q1 461 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 SPATA19Q7Z5L4 167 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 PEX5LQ8IYB4 626 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 OR52E6Q96RD3 313 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 KCNS3Q9BQ31 491 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 MEAF6Q9HAF1 191 aa19.67■□□□□ 0.74
USP4-208ENST00000464168 MYOZ1Q9NP98 299 aaPredicted RBP19.67■□□□□ 0.74
USP4-208ENST00000464168 CRNNQ9UBG3 495 aaPredicted RBP19.67■□□□□ 0.74
USP4-208ENST00000464168 B9A039 149 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 ZNF587BE7ETH6 402 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 NR5A2O00482 541 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 SNUPNO95149 360 aaKnown RBP19.66■□□□□ 0.74
USP4-208ENST00000464168 PGRP06401 933 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 PAX7P23759 505 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 NAAAQ02083 359 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 EFNB3Q15768 340 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 IQCCQ4KMZ1 466 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 VRK2Q86Y07 508 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 EPHX4Q8IUS5 362 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 CADM2Q8N3J6 435 aa19.66■□□□□ 0.74
USP4-208ENST00000464168 AENQ8WTP8 325 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms