RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 FAHD2BQ6P2I3 314 aaPredicted RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 FAHD1Q6P587 224 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 PAQR3Q6TCH7 311 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 ERN2Q76MJ5 926 aaKnown RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 C5orf24Q7Z6I8 188 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 ZBTB8OSQ8IWT0 167 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 CNTN4Q8IWV2 1026 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 TP53INP2Q8IXH6 220 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 OR5B17Q8NGF7 314 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 OR56B1Q8NGI3 324 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 OR1L6Q8NGR2 347 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 OR14K1Q8NGZ2 314 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF671Q8TAW3 534 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 TNFAIP8L1Q8WVP5 186 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 WFDC12Q8WWY7 111 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 CMTM7Q96FZ5 175 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 FAHD2AQ96GK7 314 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 NOL4LQ96MY1 436 aaPredicted RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 FCRL4Q96PJ5 515 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 ELF4Q99607 663 aaPredicted RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 SEPT5Q99719 369 aaPredicted RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 NKX3-1Q99801 234 aaPredicted RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 NRIP2Q9BQI9 281 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 MESP1Q9BRJ9 268 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 FAAP24Q9BTP7 215 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 GABARAPL3Q9BY60 117 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 TMPRSS13Q9BYE2 586 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 ZDHHC5Q9C0B5 715 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 WDR13Q9H1Z4 485 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 SLC26A1Q9H2B4 701 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 LINC00597Q9H2U6 94 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 AUNIPQ9H7T9 357 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 SFXN1Q9H9B4 322 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 TRPV4Q9HBA0 871 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 CLEC5AQ9NY25 188 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 SLC25A37Q9NYZ2 338 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 FOXJ2Q9P0K8 574 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF70Q9UC06 446 aaPredicted RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 SLC2A6Q9UGQ3 507 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 RCE1Q9Y256 329 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 EXOGQ9Y2C4 368 aaKnown RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 LSM2Q9Y333 95 aaKnown RBP3.33□□□□□ -1.88
COL8A1-205ENST00000463753 KCTD3Q9Y597 815 aa3.33□□□□□ -1.88
COL8A1-205ENST00000463753 TBC1D3FA6NER0 549 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C1QTNF9BB2RNN3 333 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 H3BN98 237 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ACOT7O00154 380 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DVL2O14641 736 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TP53I11O14683 189 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SURF4O15260 269 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 KCNAB3O43448 404 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SLC28A2O43868 658 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C1QCP02747 245 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SFTPBP07988 381 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ITGA5P08648 1049 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MGMTP16455 207 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SELEP16581 610 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RAB6AP20340 208 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CD82P27701 267 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CD80P33681 288 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CHI3L1P36222 383 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GDNFP39905 211 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MNDAP41218 407 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CHRNA4P43681 627 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR1E2P47887 323 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ART1P52961 327 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PTTG1IPP53801 180 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SOX8P57073 446 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SLC26A5P58743 744 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RPL38P63173 70 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 BTG2P78543 158 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 REEP5Q00765 189 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 IL10RBQ08334 325 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RASGEF1BQ0VAM2 473 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GTF2H2Q13888 395 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 VMACQ2NL98 169 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 AWAT1Q58HT5 328 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MESTQ5EB52 335 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C6orf136Q5SQH8 315 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DCST1Q5T197 706 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RIPPLY2Q5TAB7 128 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PRAMEF20Q5VT98 475 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TRNP1Q6NT89 227 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GTF2H2CQ6P1K8 395 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NCEH1Q6PIU2 408 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DOK6Q6PKX4 331 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM220Q6QAJ8 160 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 BTNL3Q6UXE8 466 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CHST9Q7L1S5 443 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 KCTD9Q7L273 389 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C6orf120Q7Z4R8 191 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DCXRQ7Z4W1 244 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GOLGA7Q7Z5G4 137 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CACUL1Q86Y37 369 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 LGI4Q8N135 537 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C11orf42Q8N5U0 333 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 METTL27Q8N6F8 245 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 KRTCAP2Q8N6L1 136 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NKAIN3Q8N8D7 197 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms