RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SLC25A36Q96CQ1 311 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 KTI12Q96EK9 354 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-204ENST00000463487 PSMG3-AS1Q96PY0 264 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 ASPNQ9BXN1 380 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 MMADHCQ9H3L0 296 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-204ENST00000463487 PROCRQ9UNN8 238 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 CORINQ9Y5Q5 1042 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 ENPP4Q9Y6X5 453 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 V9GYQ6 96 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 DOPEY1Q5JWR5 2465 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 KIAA1549Q9HCM3 1950 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 FLNCQ14315 2725 aa17.67■□□□□ 0.42
COL9A3-204ENST00000463487 MED12LQ86YW9 2145 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 USP9XQ93008 2570 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-204ENST00000463487 MSTNO14793 375 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 TNFSF13O75888 250 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 VAMP5O95183 116 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 MT-ATP6P00846 226 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 YES1P07947 543 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 EGR4Q05215 589 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 TRAM2Q15035 370 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 TMEM225Q6GV28 225 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 LINC00114Q6XXX2 140 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 LIX1LQ8IVB5 337 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 OFCC1Q8IZS5 231 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 RELL2Q8NC24 303 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-204ENST00000463487 BCO1Q9HAY6 547 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 CLEC4AQ9UMR7 237 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 TENM4Q6N022 2769 aa17.66■□□□□ 0.42
COL9A3-204ENST00000463487 LRRK2Q5S007 2527 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 IGKV1D-42A0A075B6H8 117 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 HTR3EA5X5Y0 456 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 AQP7P3A6NL99 342 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 ZNF724A8MTY0 619 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 AKR7A3O95154 331 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 CD8BP10966 210 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 HOXB6P17509 224 aaKnown RBP17.65■□□□□ 0.42
COL9A3-204ENST00000463487 RHCEP18577 417 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 AGTR1P30556 359 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 PEX19P40855 299 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 KIR2DL2P43627 348 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-204ENST00000463487 SMIM11AP58511 58 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 H3F3AP84243 136 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 GUSBP1Q15486 140 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 CLPTM1LQ96KA5 538 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 PSD2Q9BQI7 771 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 PTDSS2Q9BVG9 487 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 SF3B5Q9BWJ5 86 aaKnown RBP17.65■□□□□ 0.42
COL9A3-204ENST00000463487 UCK2Q9BZX2 261 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 ANKRD19PQ9H560 264 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 A4GNTQ9UNA3 340 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 RASD1Q9Y272 281 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 B3GALT5Q9Y2C3 310 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 MED31Q9Y3C7 131 aa17.65■□□□□ 0.42
COL9A3-204ENST00000463487 MPDZO75970 2070 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 NKX2-6A6NCS4 301 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 CLDN1O95832 211 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 FABP3P05413 133 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 YAP1P46937 504 aaKnown RBP17.64■□□□□ 0.41
COL9A3-204ENST00000463487 SLC16A1P53985 500 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 VWA1Q6PCB0 445 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 RRM2BQ7LG56 351 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 P3H2Q8IVL5 708 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 TUSC5Q8IXB3 177 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 TMEM239Q8WW34 195 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 TAAR8Q969N4 342 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 STARD4Q96DR4 205 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF300Q96RE9 604 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF426Q9BUY5 554 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 MAGIXQ9H6Y5 334 aa17.64■□□□□ 0.41
COL9A3-204ENST00000463487 PLEKHB1Q9UF11 243 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-204ENST00000463487 INTS1Q8N201 2190 aaKnown RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 IGKV3D-15A0A087WSY6 115 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 FTCDNL1E5RQL4 147 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 GSC2O15499 205 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 LYPD3O95274 346 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 IGF2P01344 180 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 THY1P04216 161 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 HIST1H2ABP04908 130 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 NQO1P15559 274 aaKnown RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 ATP6V1B2P21281 511 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 FLOT2Q14254 428 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 FBXL19-AS1Q494R0 122 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 FAM98BQ52LJ0 330 aaKnown RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 WDR88Q6ZMY6 472 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 HIST3H2AQ7L7L0 130 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 BTLAQ7Z6A9 289 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 GALNT5Q7Z7M9 940 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 LUZP2Q86TE4 346 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 GPAT4Q86UL3 456 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 TSPYL5Q86VY4 417 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 KIF18BQ86Y91 864 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 FAM86B1Q8N7N1 296 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 TMEM99Q8N816 258 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 SCAIQ8N9R8 606 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 ADPRHL1Q8NDY3 354 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 HIST1H2ACQ93077 130 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 RNASE6Q93091 150 aaKnown RBP17.63■□□□□ 0.41
COL9A3-204ENST00000463487 C7orf34Q96L11 122 aa17.63■□□□□ 0.41
COL9A3-204ENST00000463487 ZNF347Q96SE7 839 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms