RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 STX11O75558 287 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 IL33O95760 270 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 F10P00742 488 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 GAAP10253 952 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 FBXW4P57775 412 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 TYW3Q6IPR3 259 aaKnown RBP16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 IL20RBQ6UXL0 311 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF730Q6ZMV8 503 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 AKAP14Q86UN6 197 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 CLIP4Q8N3C7 705 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 KDF1Q8NAX2 398 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 AGAP4Q96P64 663 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 GPA33Q99795 319 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 KCNS3Q9BQ31 491 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 SAP130Q9H0E3 1048 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 QRSL1Q9H0R6 528 aaKnown RBP16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 KRCC1Q9NPI7 259 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 INIPQ9NRY2 104 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 CPAMD8Q8IZJ3 1885 aa16.45■□□□□ 0.22
ATPAF2-202ENST00000462733 CTDSP2O14595 271 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 TSPAN2O60636 221 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 PPM1BO75688 479 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 ETV1P50549 477 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 PSMD4P55036 377 aaKnown RBP16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 PSPHP78330 225 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 LARS2Q15031 903 aaKnown RBP16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 FLYWCH1Q4VC44 716 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 EIPR1Q53HC9 387 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF468Q5VIY5 522 aaPredicted RBP16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 OPN5Q6U736 354 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 LYPD8Q6UX82 237 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 TMPRSS11AQ6ZMR5 421 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 FRRS1Q6ZNA5 592 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 SLC25A46Q96AG3 418 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 RNFT2Q96EX2 444 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 SDHCQ99643 169 aaPredicted RBP16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 COQ7Q99807 217 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 BARHL1Q9BZE3 327 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF552Q9H707 407 aaPredicted RBP16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 FLRT3Q9NZU0 649 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 CMAHPQ9Y471 501 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 ACACBO00763 2458 aa16.44■□□□□ 0.22
ATPAF2-202ENST00000462733 EML6Q6ZMW3 1958 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 NINQ8N4C6 2090 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 AP3D1O14617 1153 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 FBXO45P0C2W1 286 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 TSPAN19P0C672 248 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 OMPP47874 163 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 MTNR1AP48039 350 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 RRM2BQ7LG56 351 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF619Q8N2I2 560 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 ZG16BQ96DA0 208 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 SPACA9Q96E40 222 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 JAM3Q9BX67 310 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 PLA2G12AQ9BZM1 189 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 MTHFD2LQ9H903 347 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 TXNL4BQ9NX01 149 aaKnown RBP16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 ABI3Q9P2A4 366 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 GRIP1Q9Y3R0 1128 aa16.43■□□□□ 0.22
ATPAF2-202ENST00000462733 KLF4O43474 513 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 THBS1P07996 1170 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 RNF144AP50876 292 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 PNLIPRP2P54317 469 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 RGS8P57771 180 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 LIPKQ5VXJ0 399 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 CCBE1Q6UXH8 406 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 NCCRP1Q6ZVX7 275 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 PLEKHM3Q6ZWE6 761 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 GDPD3Q7L5L3 318 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 BCDIN3DQ7Z5W3 292 aaKnown RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 POGLUT1Q8NBL1 392 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 ANKK1Q8NFD2 765 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 OR52P1PQ8NH57 321 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 AP3S1Q92572 193 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 UFD1Q92890 307 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 KCTD7Q96MP8 289 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 EGLN3Q9H6Z9 239 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 HPF1Q9NWY4 346 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 PLA2G3Q9NZ20 509 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF232Q9UNY5 417 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 V9GYH0 126 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 OR6C70A6NIJ9 312 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 ICOSLGO75144 302 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 UTS2O95399 124 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 NAGAP17050 411 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 FGF9P31371 208 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 GABRA5P31644 462 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 SLC9A3P48764 834 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 OC90Q02509 493 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 CD300CQ08708 224 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 SELENBP1Q13228 472 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF791Q3KP31 576 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 MBOAT2Q6ZWT7 520 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 VRK2Q86Y07 508 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 PEX5LQ8IYB4 626 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 ZNF614Q8N883 585 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 OR10G3Q8NGC4 313 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 OR8D4Q8NGM9 314 aa16.42■□□□□ 0.22
ATPAF2-202ENST00000462733 POLE3Q9NRF9 147 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms