RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SH3GLB1Q9Y371 365 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 WDR45Q9Y484 360 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 LRRC42Q9Y546 428 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 SIRT4Q9Y6E7 314 aaPredicted RBP6.69□□□□□ -1.34
UBE4B-204ENST00000462658 USP24Q9UPU5 2620 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 PTPRBP23467 1997 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 DSPPQ9NZW4 1301 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 ACACBO00763 2458 aa6.69□□□□□ -1.34
UBE4B-204ENST00000462658 COL27A1Q8IZC6 1860 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZZEF1O43149 2961 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 IGHV3-20A0A0C4DH32 117 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 SPAARA0A1B0GVQ0 90 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 A0A1W2PNU3 283 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 AGAP5A6NIR3 686 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 C9J4A7 227 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PDLIM1O00151 329 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 SOCS2O14508 198 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ACOX3O15254 700 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 DPM1O60762 260 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 STK17BO94768 372 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 DIRAS1O95057 198 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 IFNW1P05000 195 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 GUSBP08236 651 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 CYC1P08574 325 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 CD63P08962 238 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PABPC4LP0CB38 370 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF23P17027 643 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF26P17031 533 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PIGAP37287 484 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PPICP45877 212 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 YAP1P46937 504 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 LIMK1P53667 647 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 GPR68Q15743 365 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 COLEC12Q5KU26 742 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 AP1ARQ63HQ0 302 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 TYW3Q6IPR3 259 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 SLC18B1Q6NT16 456 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 DHRS4L2Q6PKH6 230 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 TMEM205Q6UW68 189 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 FAM198BQ6UWH4 519 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 NPSR1Q6W5P4 371 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF517Q6ZMY9 492 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 CPEB2Q7Z5Q1 589 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 TSEN54Q7Z6J9 526 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 CARM1Q86X55 608 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 VRK2Q86Y07 508 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PEX5LQ8IYB4 626 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF619Q8N2I2 560 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 GALNT16Q8N428 558 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 SVOPLQ8N434 492 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 CBR4Q8N4T8 237 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PACRGLQ8N7B6 248 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 OR4N2Q8NGD1 307 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 OR52P1PQ8NH57 321 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 OR5K1Q8NHB7 308 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 WDR36Q8NI36 951 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 RMND5BQ96G75 393 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF845Q96IR2 970 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF300Q96RE9 604 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF347Q96SE7 839 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF184Q99676 751 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 SLC29A1Q99808 456 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PINK1Q9BXM7 581 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 RSPO3Q9BXY4 272 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ITPAQ9BY32 194 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF350Q9GZX5 532 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 WDR54Q9H977 334 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 THSD1Q9NS62 852 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 NDUFAF4Q9P032 175 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 COPS7AQ9UBW8 275 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 C19orf25Q9UFG5 118 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 PADI1Q9ULC6 663 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 C15orf41Q9Y2V0 281 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 FAM32AQ9Y421 112 aaKnown RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 OR10H1Q9Y4A9 318 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 KMT2BQ9UMN6 2715 aaPredicted RBP6.68□□□□□ -1.34
UBE4B-204ENST00000462658 IGF2RP11717 2491 aa6.68□□□□□ -1.34
UBE4B-204ENST00000462658 FREM2Q5SZK8 3169 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 SEC16AO15027 2179 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 C2orf92A0A1B0GVN3 265 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 SAGE2PA6NJ88 616 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 OR6C76A6NM76 312 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 G3V2T6 193 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 H0YJX3 145 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 KIAA0513O60268 411 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 E2F6O75461 281 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 EPPINO95925 133 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 LGI1O95970 557 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 IGKV1D-16P01601 117 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 DBIP07108 87 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 CT45A8P0DMV1 189 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 CT45A9P0DMV2 189 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 IL7RP16871 459 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 ATP6V1C1P21283 382 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 CSRP1P21291 193 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 DRD5P21918 477 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 TACR3P29371 465 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 DCTP40126 519 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 RFX3P48380 749 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms