RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 CAPZA2P47755 286 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 SLC16A1P53985 500 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 TAS2R41P59536 307 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 PRPS1P60891 318 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 SF3A3Q12874 501 aaKnown RBP eCLIP7.94□□□□□ -1.148e-23■■■■□ 21.4
DDX39B-216ENST00000462421 RUNDC3AQ59EK9 446 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 TIMM23BQ5SRD1 257 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 C1QTNF12Q5T7M4 302 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 FAM69AQ5T7M9 428 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 SHEQ5VZ18 495 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 REP15Q6BDI9 236 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 TTC33Q6PID6 262 aaPredicted RBP7.94□□□□□ -1.14
DDX39B-216ENST00000462421 HDDC2Q7Z4H3 204 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 FUNDC1Q8IVP5 155 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 UEVLDQ8IX04 471 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 CLIP4Q8N3C7 705 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 C17orf78Q8N4C9 275 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 SCAIQ8N9R8 606 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 OR9K2Q8NGE7 335 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 OR10A6Q8NH74 314 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 MFSD8Q8NHS3 518 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 MBD6Q96DN6 1003 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 CMTM5Q96DZ9 223 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 MCHR1Q99705 422 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 CPPED1Q9BRF8 314 aaPredicted RBP7.94□□□□□ -1.14
DDX39B-216ENST00000462421 FKRPQ9H9S5 495 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 B3GALT5Q9Y2C3 310 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 AMDHD2Q9Y303 409 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 PCNX1Q96RV3 2341 aa7.94□□□□□ -1.14
DDX39B-216ENST00000462421 ARHGAP21Q5T5U3 1957 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 CREBBPQ92793 2442 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 LOC100653049A0A140TA62 436 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 LIPT2A6NK58 231 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 AQP7P3A6NL99 342 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 M0R1B8 84 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 FRS3O43559 492 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 EFNA2O43921 213 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 FMO6PO60774 539 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 KRT34O76011 436 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 CD99P14209 185 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 MPGP29372 298 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 LSP1P33241 339 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 MVDP53602 400 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 CDH11P55287 796 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 SH3BGRP55822 239 aaPredicted RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 RPS4XP62701 263 aaKnown RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 NKX6-1P78426 367 aaPredicted RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 MXRA7P84157 204 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 BNIP2Q12982 314 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 PMS2P3Q13401 168 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 NPTX1Q15818 432 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 LRRC23Q53EV4 343 aaPredicted RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 NIPAL3Q6P499 406 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 ZNF613Q6PF04 617 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 SLC22A25Q6T423 547 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 SPNS3Q6ZMD2 512 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 CYP4Z1Q86W10 505 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 CCDC103Q8IW40 242 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 GABRG1Q8N1C3 465 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 LSMEM1Q8N8F7 131 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 SMYD1Q8NB12 490 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 PIK3C3Q8NEB9 887 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 C1orf162Q8NEQ5 155 aaPredicted RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 OR2T12Q8NG77 320 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 RP9Q8TA86 221 aaKnown RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 NANOS1Q8WY41 292 aaKnown RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 AKAP1Q92667 903 aaKnown RBP eCLIP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 NRGNQ92686 78 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 TMEM45BQ96B21 275 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 C3orf49Q96BT1 292 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 LRRC58Q96CX6 371 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 HS6ST2Q96MM7 605 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 ADAM19Q9H013 955 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 EFCAB1Q9HAE3 211 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 KRCC1Q9NPI7 259 aaPredicted RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 SLC25A37Q9NYZ2 338 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 PRSS50Q9UI38 385 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 FLVCR1Q9Y5Y0 555 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 CENPEQ02224 2701 aa7.93□□□□□ -1.14
DDX39B-216ENST00000462421 INTS1Q8N201 2190 aaKnown RBP7.93□□□□□ -1.14
DDX39B-216ENST00000462421 A0A1B0GWA3 101 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 FAM221AA4D161 298 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 OR5H1A6NKK0 313 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 CPSF4LA6NMK7 179 aaKnown RBP7.92□□□□□ -1.14
DDX39B-216ENST00000462421 MCIDASD6RGH6 385 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 M0QX08 132 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 HS3ST1O14792 307 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 BCAS1O75363 584 aaPredicted RBP7.92□□□□□ -1.14
DDX39B-216ENST00000462421 ATE1O95260 518 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 STAMBPO95630 424 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 MT-ATP6P00846 226 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 OPN1SWP03999 348 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 ERCC1P07992 297 aaPredicted RBP7.92□□□□□ -1.14
DDX39B-216ENST00000462421 NR2C1P13056 603 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 CCKARP32238 428 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 GUCA1AP43080 201 aaPredicted RBP7.92□□□□□ -1.14
DDX39B-216ENST00000462421 HOXC5Q00444 222 aa7.92□□□□□ -1.14
DDX39B-216ENST00000462421 KLF10Q13118 480 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms