RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 NAA11Q9BSU3 229 aaPredicted RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 PTDSS2Q9BVG9 487 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 GABARAPL3Q9BY60 117 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 DEFB127Q9H1M4 99 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 EXO5Q9H790 373 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 SMURF2Q9HAU4 748 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 C20orf141Q9NUB4 165 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 ALKBH4Q9NXW9 302 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 IL20Q9NYY1 176 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 TMEFF2Q9UIK5 374 aaPredicted RBP9.61□□□□□ -0.87
RTF1-202ENST00000462276 CDH10Q9Y6N8 788 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 PIEZO2Q9H5I5 2752 aa9.61□□□□□ -0.87
RTF1-202ENST00000462276 CPAMD8Q8IZJ3 1885 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ZC3H12DA2A288 527 aaKnown RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 FTCDNL1E5RQL4 147 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 NPIPA5E9PKD4 350 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 H0YAE9 185 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 H3BML4 177 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 SULT2B1O00204 365 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 KPNA4O00629 521 aaPredicted RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 BCKDKO14874 412 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 IDH3BO43837 385 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 PTP4A3O75365 173 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 OR6A2O95222 327 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 BGLAPP02818 100 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 HOXD4P09016 255 aaPredicted RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 TSPAN19P0C672 248 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 APEHP13798 732 aaKnown RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 MAKP20794 623 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 RPS5P46782 204 aaKnown RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 LHX2P50458 406 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ZP4Q12836 540 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 SGCBQ16585 318 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 NADK2Q4G0N4 442 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 WLSQ5T9L3 541 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ZNF324BQ6AW86 544 aaPredicted RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 C19orf48Q6RUI8 117 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 SMARCD3Q6STE5 483 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 PAQR6Q6TCH4 344 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 KLHL17Q6TDP4 642 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 CHMP1BQ7LBR1 199 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 SLC46A3Q7Z3Q1 461 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 GHDCQ8N2G8 530 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 GALNT4Q8N4A0 578 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ATP6V1C2Q8NEY4 427 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 OR52L1Q8NGH7 329 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 OR5M1Q8NGP8 315 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 OR5J2Q8NH18 312 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 OR2V1Q8NHB1 315 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 FAR1Q8WVX9 515 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 CPNE4Q96A23 557 aaPredicted RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 ARL5BQ96KC2 179 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 GPR137Q96N19 417 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ZNF184Q99676 751 aaPredicted RBP9.6□□□□□ -0.87
RTF1-202ENST00000462276 NPAS1Q99742 590 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 NIPSNAP1Q9BPW8 284 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 PRRG3Q9BZD7 231 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 OR11A1Q9GZK7 315 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 SLC6A15Q9H2J7 730 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 Q9H521 79 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 FANCFQ9NPI8 374 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 REV1Q9UBZ9 1251 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 NPIPA1Q9UND3 350 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 BAIAP2Q9UQB8 552 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 SIGLEC7Q9Y286 467 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 HIF3AQ9Y2N7 669 aa9.6□□□□□ -0.87
RTF1-202ENST00000462276 ITPR1Q14643 2758 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 A0A0J9YW62 118 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 NPIPB13A6NJU9 1138 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 AHRRA9YTQ3 701 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 SHISA8B8ZZ34 492 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 NPIPB4C9JG80 1138 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 CDC42EP2O14613 210 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 SLC16A6O15403 523 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 PIP5K1CO60331 668 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 NDUFB2O95178 105 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 HMGN1P05114 100 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 CELA3AP09093 270 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 POU2F1P14859 743 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 IL11P20809 199 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 SLC6A6P31641 620 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 SFTPDP35247 375 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 PTGER4P35408 488 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 GPR4P46093 362 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 GIPRP48546 466 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 DIO1P49895 249 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 CRISP1P54107 249 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 OR2B6P58173 313 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 RPS4XP62701 263 aaKnown RBP9.59□□□□□ -0.87
RTF1-202ENST00000462276 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
RTF1-202ENST00000462276 H3F3AP84243 136 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 FOXK1P85037 733 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 PMP22Q01453 160 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 NPRL3Q12980 569 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 PMS2P3Q13401 168 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 IL18R1Q13478 541 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 OR7A5Q15622 319 aa9.59□□□□□ -0.87
RTF1-202ENST00000462276 C1QL3Q5VWW1 255 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms