RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ABCD4O14678 606 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 NPIPB7O75200 414 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 TSPO2Q5TGU0 170 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 ZIC4Q8N9L1 334 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 OR52N5Q8NH56 324 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 BBS10Q8TAM1 723 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 SLC35B4Q969S0 331 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 RADILQ96JH8 1075 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 TAPBPLQ9BX59 468 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 AMBRA1Q9C0C7 1298 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 PIF1Q9H611 641 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 SLC7A10Q9NS82 523 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 TMEM45AQ9NWC5 275 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 UPB1Q9UBR1 384 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 DCTN4Q9UJW0 460 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 PLCE1Q9P212 2302 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 TMEM229AB2RXF0 380 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 C5orf58C9J3I9 102 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 NR5A2O00482 541 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 FRS3O43559 492 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 ETS2P15036 469 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 P2RY4P51582 365 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 PAGE3Q5JUK9 113 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 C1orf140Q5VVS0 124 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 TMEM108Q6UXF1 575 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 WDR31Q8NA23 367 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 GTPBP3Q969Y2 492 aaKnown RBP16.65■□□□□ 0.26
VARS-220ENST00000461874 TRMT61AQ96FX7 289 aaKnown RBP16.65■□□□□ 0.26
VARS-220ENST00000461874 ZNF385AQ96PM9 386 aaKnown RBP16.65■□□□□ 0.26
VARS-220ENST00000461874 RSPO3Q9BXY4 272 aaPredicted RBP16.65■□□□□ 0.26
VARS-220ENST00000461874 ADPRHL2Q9NX46 363 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 GMEB1Q9Y692 573 aa16.65■□□□□ 0.26
VARS-220ENST00000461874 HIVEP2P31629 2446 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 ABCA2Q9BZC7 2435 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 A0A1W2PR80 420 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 CD8AP01732 235 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 PPIBP23284 216 aaKnown RBP16.64■□□□□ 0.25
VARS-220ENST00000461874 PTAFRP25105 342 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 CDKN1AP38936 164 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 ATP4BP51164 291 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 ZNF83P51522 516 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 CDH11P55287 796 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 IRX1P78414 480 aaPredicted RBP16.64■□□□□ 0.25
VARS-220ENST00000461874 HOXC5Q00444 222 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 GCNT6Q5T4J0 391 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 C9orf135Q5VTT2 229 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 TMEM225Q6GV28 225 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 KLHL17Q6TDP4 642 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 AAED1Q7RTV5 226 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 GPAT4Q86UL3 456 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 DTX2Q86UW9 622 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 C10orf111Q8N326 155 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 C1orf162Q8NEQ5 155 aaPredicted RBP16.64■□□□□ 0.25
VARS-220ENST00000461874 STK35Q8TDR2 534 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 TRAF4Q9BUZ4 470 aaPredicted RBP16.64■□□□□ 0.25
VARS-220ENST00000461874 GRIP2Q9C0E4 1043 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 VAPAQ9P0L0 249 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 MGAT4BQ9UQ53 548 aa16.64■□□□□ 0.25
VARS-220ENST00000461874 TRBV5-3A0A0A0MS03 114 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 VAMP5O95183 116 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 ARAFP10398 606 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 CD40P25942 277 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 MPGP29372 298 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 PRKAR1BP31321 381 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 CDK6Q00534 326 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 TGFBR3Q03167 851 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 TNK1Q13470 666 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 ETFDHQ16134 617 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 AGKQ53H12 422 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 REEP3Q6NUK4 255 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 C17orf78Q8N4C9 275 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 POMGNT2Q8NAT1 580 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 NFKBIDQ8NI38 313 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 SLCO5A1Q9H2Y9 848 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 SLC17A5Q9NRA2 495 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 INTS9Q9NV88 658 aaKnown RBP16.63■□□□□ 0.25
VARS-220ENST00000461874 FAIMQ9NVQ4 179 aa16.63■□□□□ 0.25
VARS-220ENST00000461874 JMJD1CQ15652 2540 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 HMGB1P1B2RPK0 211 aaPredicted RBP16.62■□□□□ 0.25
VARS-220ENST00000461874 AHSA1O95433 338 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 EGR4Q05215 589 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 SQLEQ14534 574 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 CLEC12BQ2HXU8 276 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 C1QTNF12Q5T7M4 302 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 SLC22A25Q6T423 547 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 C6orf89Q6UWU4 347 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
VARS-220ENST00000461874 MFSD8Q8NHS3 518 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 C1QTNF6Q9BXI9 259 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 ALG2Q9H553 416 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 IKZF5Q9H5V7 419 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 RASD1Q9Y272 281 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 AMDHD2Q9Y303 409 aa16.62■□□□□ 0.25
VARS-220ENST00000461874 FTCDNL1E5RQL4 147 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 E7EQL1 145 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 M0R1B8 84 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 GPX2P18283 190 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 SPOCK1Q08629 439 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms