RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 DCDC2BA2VCK2 349 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 DIRAS3O95661 229 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 MPLP40238 635 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 APOBEC1P41238 236 aaKnown RBP16.3■□□□□ 0.2
CHRD-208ENST00000460627 CLDN17P56750 224 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 AKAP1Q92667 903 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHRD-208ENST00000460627 C14orf119Q9NWQ9 140 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 AK6Q9Y3D8 172 aaKnown RBP16.3■□□□□ 0.2
CHRD-208ENST00000460627 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 OR6C70A6NIJ9 312 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 AGAP5A6NIR3 686 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 DNAJB6O75190 326 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 PTHP01270 115 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 SLC1A3P43003 542 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 CD97P48960 835 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 DCDC5Q6ZRR9 648 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 ABI3BPQ7Z7G0 1075 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 ANKRD13BQ86YJ7 626 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 BCORP1Q8N888 145 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 RHOXF1Q8NHV9 184 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 DUS3LQ96G46 650 aaKnown RBP16.29■□□□□ 0.2
CHRD-208ENST00000460627 NUDT15Q9NV35 164 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 KLHL9Q9P2J3 617 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 ASB4Q9Y574 426 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 ENPP1P22413 925 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 CDNFQ49AH0 187 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 SLC25A25Q6KCM7 469 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 C1orf210Q8IVY1 113 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 CASTOR1Q8WTX7 329 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 FOXRED1Q96CU9 486 aaPredicted RBP16.29■□□□□ 0.2
CHRD-208ENST00000460627 ARID1BQ8NFD5 2236 aaPredicted RBP16.29■□□□□ 0.2
CHRD-208ENST00000460627 TRAV6A0A075B6T7 132 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 PIGBOS1A0A0B4J2F0 54 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 A6NHS1 94 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 ZGLP1P0C6A0 271 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 CD40LGP29965 261 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 PRSS3P35030 304 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 CARD18P57730 90 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 STK11Q15831 433 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 TMEM205Q6UW68 189 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 SLC16A14Q7RTX9 510 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 SPRED2Q7Z698 418 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 GIMAP5Q96F15 307 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 THOC3Q96J01 351 aaKnown RBP16.29■□□□□ 0.2
CHRD-208ENST00000460627 PRDM7Q9NQW5 492 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 COPZ2Q9P299 210 aa16.29■□□□□ 0.2
CHRD-208ENST00000460627 TRAV18A0A075B6X5 111 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 ARHGAP33O14559 1287 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 CD83Q01151 205 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 ECH1Q13011 328 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 SLC35D2Q76EJ3 337 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 LMF1Q96S06 567 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 ACER3Q9NUN7 267 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 YARS2Q9Y2Z4 477 aaKnown RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 TMEM184BQ9Y519 407 aaPredicted RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 GAPDHSO14556 408 aaPredicted RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 TBX19O60806 448 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 SNAPC5O75971 98 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 FBXO45P0C2W1 286 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 NIPAL2Q9H841 368 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 SEMA4GQ9NTN9 838 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 EMC9Q9Y3B6 208 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 KANTRA0A1W2PQU2 76 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 CLDN24A6NM45 220 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 HTR1FP30939 366 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 PSMA6P60900 246 aaKnown RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 CCL7P80098 99 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 C3orf33Q6P1S2 294 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 CPT1CQ8TCG5 803 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 ZNF582Q96NG8 517 aaPredicted RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 PRR14Q9BWN1 585 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 CACNG6Q9BXT2 260 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 SLC5A7Q9GZV3 580 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 CCDC59Q9P031 241 aaKnown RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 ZNF225Q9UK10 706 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 A0A087WUU8 490 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 ANKRD30BLA7E2S9 258 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 RAD1O60671 282 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 DLSTP36957 453 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 PNLIPRP2P54317 469 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 MLC1Q15049 377 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 NTRK2Q16620 822 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 H1FNTQ75WM6 255 aaPredicted RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 RBM45Q8IUH3 476 aaKnown RBP16.28■□□□□ 0.2
CHRD-208ENST00000460627 PPP1R35Q8TAP8 253 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 HMGCLL1Q8TB92 370 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 ADAMTS14Q8WXS8 1223 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 NMNAT3Q96T66 252 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 IKZF5Q9H5V7 419 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 B3GNT3Q9Y2A9 372 aa16.28■□□□□ 0.2
CHRD-208ENST00000460627 OR2AT4A6NND4 320 aa16.27■□□□□ 0.2
CHRD-208ENST00000460627 FCMRO60667 390 aa16.27■□□□□ 0.2
CHRD-208ENST00000460627 TFPTP0C1Z6 253 aa16.27■□□□□ 0.2
CHRD-208ENST00000460627 TFF2Q03403 129 aa16.27■□□□□ 0.2
CHRD-208ENST00000460627 CNN3Q15417 329 aaKnown RBP16.27■□□□□ 0.2
CHRD-208ENST00000460627 SMAD2Q15796 467 aaKnown RBP16.27■□□□□ 0.2
CHRD-208ENST00000460627 NIPAL3Q6P499 406 aa16.27■□□□□ 0.2
CHRD-208ENST00000460627 ZADH2Q8N4Q0 377 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms