RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 TMEM246Q9BRR3 403 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 SLC35A5Q9BS91 424 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 ZNF416Q9BWM5 594 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 POLR1EQ9GZS1 481 aaKnown RBP0.73□□□□□ -2.29
PTPN22-203ENST00000460620 MID1IP1Q9NPA3 183 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 SAMSN1Q9NSI8 373 aaKnown RBP0.73□□□□□ -2.29
PTPN22-203ENST00000460620 ZNRD1Q9P1U0 126 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 TMEM14AQ9Y6G1 99 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 MYO16Q9Y6X6 1858 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 S4R3C0 116 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 YEATS2Q9ULM3 1422 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 CARMIL1Q5VZK9 1371 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 MN1Q10571 1320 aaPredicted RBP0.73□□□□□ -2.29
PTPN22-203ENST00000460620 IGKV2-24A0A0C4DH68 120 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 PRSS37A4D1T9 235 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 C16orf90A8MZG2 172 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 DCTN6O00399 190 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 VEGFDO43915 354 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 HMOX1P09601 288 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 P0C880 135 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 MUTP22033 750 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 HSD17B7P56937 341 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 C2orf76Q3KRA6 126 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 GPRC6AQ5T6X5 926 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 ETFRF1Q6IPR1 90 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 CBLN3Q6UW01 205 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 H2AFVQ71UI9 128 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 KIR3DL3Q8N743 410 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 MINDY2Q8NBR6 621 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 FAM71CQ8NEG0 241 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 OR1N2Q8NGR9 330 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 URGCPQ8TCY9 931 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 PDXPQ96GD0 296 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 SEC22AQ96IW7 307 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 COL21A1Q96P44 957 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 NAT9Q9BTE0 207 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 SRMSQ9H3Y6 488 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 FOXJ3Q9UPW0 622 aa0.73□□□□□ -2.29
PTPN22-203ENST00000460620 STRAPQ9Y3F4 350 aaKnown RBP0.73□□□□□ -2.29
PTPN22-203ENST00000460620 KMT2DO14686 5537 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 RPGRIP1LQ68CZ1 1315 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 A0A1B0GVX0 72 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 VSTM2BA6NLU5 285 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 KINO60870 393 aaKnown RBP0.72□□□□□ -2.29
PTPN22-203ENST00000460620 B3GAT3O94766 335 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 CDRT1O95170 752 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 RRASP10301 218 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 CD99P14209 185 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 FGF9P31371 208 aaPredicted RBP0.72□□□□□ -2.29
PTPN22-203ENST00000460620 DAP3P51398 398 aaKnown RBP0.72□□□□□ -2.29
PTPN22-203ENST00000460620 GABPB1Q06547 395 aaPredicted RBP0.72□□□□□ -2.29
PTPN22-203ENST00000460620 ZNF816Q0VGE8 651 aaPredicted RBP0.72□□□□□ -2.29
PTPN22-203ENST00000460620 CYTH1Q15438 398 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 SGCAQ16586 387 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 PARP15Q460N3 678 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 CCDC40Q4G0X9 1142 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 MARCH8Q5T0T0 291 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 ZNF684Q5T5D7 378 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 C12orf60Q5U649 245 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 WDR88Q6ZMY6 472 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 CBWD2Q8IUF1 395 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 OR2G3Q8NGZ4 309 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 NANPQ8TBE9 248 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 FCGR1BQ92637 280 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 PAGE5Q96GU1 130 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 HPDLQ96IR7 371 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 AKR1E2Q96JD6 320 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 NSMCE2Q96MF7 247 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 SLC6A7Q99884 636 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 DESI2Q9BSY9 194 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 ALG12Q9BV10 488 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 RHBGQ9H310 441 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 IL26Q9NPH9 171 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 ARGLU1Q9NWB6 273 aaPredicted RBP0.72□□□□□ -2.29
PTPN22-203ENST00000460620 QPCTLQ9NXS2 382 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 TBK1Q9UHD2 729 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
PTPN22-203ENST00000460620 PHF3Q92576 2039 aaKnown RBP0.71□□□□□ -2.3
PTPN22-203ENST00000460620 PTPRTO14522 1441 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 FRMPD4Q14CM0 1322 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 SDK2Q58EX2 2172 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 CFAP73A6NFT4 308 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 SLC9B1P1A6NJY1 282 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 C12orf71A8MTZ7 269 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 INS-IGF2F8WCM5 200 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 HIP1O00291 1037 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 BGLAPP02818 100 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 LGALS2P05162 132 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 UBTFL1P0CB47 393 aaPredicted RBP0.71□□□□□ -2.3
PTPN22-203ENST00000460620 ABOP16442 354 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 LGALS3P17931 250 aaKnown RBP0.71□□□□□ -2.3
PTPN22-203ENST00000460620 PGCP20142 388 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 CALCRP30988 508 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 HSPA1LP34931 641 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 NAPAP54920 295 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 GUCA2BQ16661 112 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 C1orf94Q6P1W5 598 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 CENPUQ71F23 418 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 CCDC91Q7Z6B0 441 aa0.71□□□□□ -2.3
PTPN22-203ENST00000460620 WDR86Q86TI4 376 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms