RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 RBM4Q9BWF3 364 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 REG4Q9BYZ8 158 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 AMBRA1Q9C0C7 1298 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ALG9Q9H6U8 611 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 FBXL2Q9UKC9 423 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 SNX6Q9UNH7 406 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 DNAJC15Q9Y5T4 150 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 GPR45Q9Y5Y3 372 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 A3GALT2U3KPV4 340 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 POLQO75417 2590 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 NOTOA8MTQ0 251 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 G3V2T6 193 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 NTN1O95631 604 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 HK1P19367 917 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 NR4A1P22736 598 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 CLK3P49761 638 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 FAM27E3Q08E93 113 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 TNK1Q13470 666 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 IMPG1Q17R60 797 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 CLEC12BQ2HXU8 276 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RABL3Q5HYI8 236 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PDSS1Q5T2R2 415 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 SYT6Q5T7P8 510 aaPredicted RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ZNF691Q5VV52 312 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 STAC2Q6ZMT1 411 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 GABRG1Q8N1C3 465 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.28□□□□□ -1.43e-8■■■■□ 26.4
THUMPD2-203ENST00000460072 RNF128Q8TEB7 428 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RASSF5Q8WWW0 418 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RORBQ92753 470 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 SNX18Q96RF0 628 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ZNF382Q96SR6 550 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 SEPHS2Q99611 448 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 MED18Q9BUE0 208 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 SLIRPQ9GZT3 109 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PIF1Q9H611 641 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ESRP2Q9H6T0 727 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PTGES2Q9H7Z7 377 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 DNAJB9Q9UBS3 223 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 OSGIN1Q9UJX0 560 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 CARD8Q9Y2G2 431 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RNF115Q9Y4L5 304 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 EVPLLA8MZ36 301 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ALG1L2C9J202 215 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 AZIN1O14977 448 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PIP5K1BO14986 540 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 SLC16A6O15403 523 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PRKRAO75569 313 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 OTCP00480 354 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PCSK2P16519 638 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 MAPK12P53778 367 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ISL1P61371 349 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RAC1P63000 192 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 MVKQ03426 396 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 EMX1Q04741 257 aaPredicted RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 CHRNEQ04844 493 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 CHRNB3Q05901 458 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 C17orf67Q0P5P2 114 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RFX4Q33E94 735 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 GLYATQ6IB77 296 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 USP43Q70EL4 1123 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 RPS27LQ71UM5 84 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 OR4K17Q8NGC6 315 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 FIG4Q92562 907 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PHF21BQ96EK2 531 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 REXO5Q96IC2 774 aaKnown RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 OPN3Q9H1Y3 402 aaPredicted RBP6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 MMP27Q9H306 513 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 IPPKQ9H8X2 491 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 BCO1Q9HAY6 547 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 MYNNQ9NPC7 610 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 AIG1Q9NVV5 245 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ALKBH4Q9NXW9 302 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 PPP4R1LQ9P1A2 415 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 TIMM22Q9Y584 194 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 ZNF780BQ9Y6R6 833 aa6.28□□□□□ -1.4
THUMPD2-203ENST00000460072 NCF1BA6NI72 391 aaPredicted RBP6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 NCF1CA8MVU1 366 aaPredicted RBP6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 VWC2LB2RUY7 222 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 IDH3BO43837 385 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 KCNK2O95069 426 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 PGRP06401 933 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 NCF1P14598 390 aaPredicted RBP6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 HOXB6P17509 224 aaKnown RBP6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 IL12BP29460 328 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 AGTR1P30556 359 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 NR4A2P43354 598 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 CXCR4P61073 352 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 TUBA1BP68363 451 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 SNTB1Q13884 538 aaKnown RBP6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 MLC1Q15049 377 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 MAPK11Q15759 364 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 TUSC1Q2TAM9 212 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 TUBA1AQ71U36 451 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 LUZP2Q86TE4 346 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 ZNF610Q8N9Z0 462 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 PERPQ96FX8 193 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 CCDC115Q96NT0 180 aa6.27□□□□□ -1.41
THUMPD2-203ENST00000460072 BRINP2Q9C0B6 783 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms