RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 FOLR1P15328 257 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 FBLP22087 321 aaKnown RBP15.22■□□□□ 0.03
CCDC43-202ENST00000457422 THBS2P35442 1172 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 NAA10P41227 235 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-202ENST00000457422 ERVK-25P63136 954 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 IL18Q14116 193 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 CDK5R1Q15078 307 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 EBPQ15125 230 aaKnown RBP15.22■□□□□ 0.03
CCDC43-202ENST00000457422 IDNKQ5T6J7 187 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 FAM27D1Q5T7N8 215 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 PAMR1Q6UXH9 720 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 PRSS42Q7Z5A4 293 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 LRRC28Q86X40 367 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-202ENST00000457422 KMT5CQ86Y97 462 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 LRRC75AQ8NAA5 344 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 MOSPD2Q8NHP6 518 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 ZPLD1Q8TCW7 415 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 GHSRQ92847 366 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 RASD2Q96D21 266 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 SMIM19Q96E16 107 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 PELI1Q96FA3 418 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 ZNF304Q9HCX3 659 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 MMP25Q9NPA2 562 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 KLHL1Q9NR64 748 aa15.22■□□□□ 0.03
CCDC43-202ENST00000457422 SEC16AO15027 2179 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 A0A0G2JK05 382 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 TO15178 435 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ASAH2BP0C7U1 165 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ACVR1BP36896 505 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 SLC6A8P48029 635 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 AFF3P51826 1226 aaKnown RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 GBX2P52951 348 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 DAB2P98082 770 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 HSF2Q03933 536 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 EGR4Q05215 589 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 TP53I3Q53FA7 332 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ACSM3Q53FZ2 586 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 YOD1Q5VVQ6 348 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 TRIQKQ629K1 86 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 PTCRAQ6ISU1 281 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 SFXN4Q6P4A7 337 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 FAM122BQ7Z309 247 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 GPR135Q8IZ08 494 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ZNRF4Q8WWF5 429 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ZNF524Q96C55 264 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 MRPL48Q96GC5 212 aaKnown RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ZC3HAV1LQ96H79 300 aaKnown RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 FAM210AQ96ND0 272 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 KLHDC3Q9BQ90 382 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 NUDT9Q9BW91 350 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ASXL3Q9C0F0 2248 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 TMEM221A6NGB7 291 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 BCAT2O15382 392 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 MAGEB4O15481 346 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 GLCEO94923 617 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 CD14P08571 375 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 GIMD1P0DJR0 217 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ELK1P19419 428 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 SLC25A1P53007 311 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 CCDC58Q4VC31 144 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 EGFL6Q8IUX8 553 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 PRSS58Q8IYP2 241 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 SLC25A45Q8N413 288 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 DAZLQ92904 295 aaKnown RBP15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ADOQ96SZ5 270 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 NRSN2Q9GZP1 204 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 ADAM19Q9H013 955 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 B3GAT2Q9NPZ5 323 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 NANSQ9NR45 359 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 CYSLTR2Q9NS75 346 aa15.21■□□□□ 0.03
CCDC43-202ENST00000457422 FER1L5A0AVI2 2057 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TNRC18O15417 2968 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TRAV1-2A0A0B4J238 106 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 A0A1B0GVT2 93 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 A0A1W2PQD3 144 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 B4DXG7 233 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 ICOSLGO75144 302 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 CCNKO75909 580 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TXNDC12O95881 172 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TRAPPC2P0DI81 140 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TRAPPC2BP0DI82 140 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 UQCRC1P31930 480 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 AQP2P41181 271 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 SIRPAP78324 504 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 VWA2Q5GFL6 755 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 LINC01590Q5TEZ4 76 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 ARHGAP40Q5TG30 622 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 C1orf189Q5VU69 101 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 RPL22L1Q6P5R6 122 aaKnown RBP15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TRILQ7L0X0 811 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 C9orf40Q8IXQ3 194 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 C10orf53Q8N6V4 93 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 C19orf18Q8NEA5 215 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 MOGAT1Q96PD6 335 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 KCNJ15Q99712 375 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC43-202ENST00000457422 NCDNQ9UBB6 729 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 NPFFR2Q9Y5X5 522 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 TEX13CA0A0J9YWL9 993 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms