RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 GTF2IRD2BQ6EKJ0 949 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 PAQR6Q6TCH4 344 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 ASRGL1Q7L266 308 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 FAM214BQ7L5A3 538 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 GTF2IRD2Q86UP8 949 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 P3H2Q8IVL5 708 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 RNF217Q8TC41 542 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 CA5BP1Q8WTZ4 195 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 ZHX1-C8orf76Q96EF9 292 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 ZNF300Q96RE9 604 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-215ENST00000457039 EPYCQ99645 322 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 SLC19A3Q9BZV2 496 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 BCO1Q9HAY6 547 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 JKAMPQ9P055 326 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 SLC7A8Q9UHI5 535 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 MPDZO75970 2070 aa12.6□□□□□ -0.39
SMPD4-215ENST00000457039 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 IGKV3D-15A0A087WSY6 115 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 OR2T1O43869 369 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 CLDN1O95832 211 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 CGAP01215 116 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 BGLAPP02818 100 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 RHCEP18577 417 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 PTNP21246 168 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 BMP5P22003 454 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 RBM34P42696 430 aaKnown RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 SLC16A1P53985 500 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 TFF3Q07654 80 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 ST3GAL3Q11203 375 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 SLC25A35Q3KQZ1 300 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 FAM69AQ5T7M9 428 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 VWA1Q6PCB0 445 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 TTC33Q6PID6 262 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 CCDC121Q6ZUS5 278 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 CCDC103Q8IW40 242 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 TMEM99Q8N816 258 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 PIK3C3Q8NEB9 887 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 TMEM255BQ8WV15 326 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 STARD4Q96DR4 205 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 NAA11Q9BSU3 229 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 TAPBPLQ9BX59 468 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 UCK2Q9BZX2 261 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 MMADHCQ9H3L0 296 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 MEPEQ9NQ76 525 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 KLHL9Q9P2J3 617 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 RHCGQ9UBD6 479 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 CLEC4AQ9UMR7 237 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 POMPQ9Y244 141 aa12.59□□□□□ -0.39
SMPD4-215ENST00000457039 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
SMPD4-215ENST00000457039 AQP12BA6NM10 295 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 FAM90A27PA6NNH2 459 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 hCG_2039718K7EN88 272 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 AKR7A3O95154 331 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 IGF2P01344 180 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 AGTR1P30556 359 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 MAGEA2P43356 314 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 UGT2B15P54855 530 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 RASGEF1BQ0VAM2 473 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 OTUD3Q5T2D3 398 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-215ENST00000457039 BTLAQ7Z6A9 289 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 TUSC5Q8IXB3 177 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 AQP12AQ8IXF9 295 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 OR6K3Q8NGY3 331 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 TMEM239Q8WW34 195 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 POP5Q969H6 163 aaKnown RBP12.58□□□□□ -0.4
SMPD4-215ENST00000457039 MCUR1Q96AQ8 359 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 DHRS1Q96LJ7 313 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 HS6ST2Q96MM7 605 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 MOGAT1Q96PD6 335 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 FNDC11Q9BVV2 318 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 IL1RAPQ9NPH3 570 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 SEC14L4Q9UDX3 406 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 KLF2Q9Y5W3 355 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-215ENST00000457039 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
SMPD4-215ENST00000457039 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.4
SMPD4-215ENST00000457039 UTP20O75691 2785 aaKnown RBP12.57□□□□□ -0.4
SMPD4-215ENST00000457039 BAHCC1Q9P281 2608 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 NKX2-6A6NCS4 301 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 LRRN3E7EW58 273 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 DIRAS1O95057 198 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 PLGP00747 810 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-215ENST00000457039 MT-ND1P03886 318 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 FABP3P05413 133 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 YES1P07947 543 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 CD8BP10966 210 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 ITGA2P17301 1181 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 GRPRP30550 384 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 IFNA8P32881 189 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 SIRPAP78324 504 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 LSM11P83369 360 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMPD4-215ENST00000457039 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 MFSD13AQ14CX5 517 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 TRAM2Q15035 370 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 ZNF74Q16587 644 aa12.57□□□□□ -0.4
SMPD4-215ENST00000457039 FBXL19-AS1Q494R0 122 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms