RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PTOV1Q86YD1 416 aa14.32□□□□□ -0.12
CPSF6-203ENST00000456847 ZNF433Q8N7K0 673 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-203ENST00000456847 OR9K2Q8NGE7 335 aa14.32□□□□□ -0.12
CPSF6-203ENST00000456847 A0A1B0GWA3 101 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 OPN1SWP03999 348 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 HTR2AP28223 471 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 MAPRE2Q15555 327 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 TRMT5Q32P41 509 aaKnown RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 ALG10BQ5I7T1 473 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 TIMM23BQ5SRD1 257 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 CGB2Q6NT52 195 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 AAED1Q7RTV5 226 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 RANBP3LQ86VV4 465 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 P3H2Q8IVL5 708 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 SMYD1Q8NB12 490 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 SF3B5Q9BWJ5 86 aaKnown RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 C12orf10Q9HB07 376 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 TMEM27Q9HBJ8 222 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 MED4Q9NPJ6 270 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 TAS2R16Q9NYV7 291 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 MALT1Q9UDY8 824 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 PRR14LQ5THK1 2151 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 NTF4P34130 210 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 NKX6-1P78426 367 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 FOXD4Q12950 439 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 CYLC2Q14093 348 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 NCMAPQ5T1S8 102 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 C9orf135Q5VTT2 229 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 C6orf89Q6UWU4 347 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 SLC30A8Q8IWU4 369 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 LSMEM1Q8N8F7 131 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 OR10A6Q8NH74 314 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 MFSD8Q8NHS3 518 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 DNAJA4Q8WW22 397 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 AKAP1Q92667 903 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPSF6-203ENST00000456847 SLC38A4Q969I6 547 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 TMEM45BQ96B21 275 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 PIP5K1AQ99755 562 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 PRR14Q9BWN1 585 aa14.31□□□□□ -0.12
CPSF6-203ENST00000456847 OR5H1A6NKK0 313 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 FBP2O00757 339 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 HS3ST1O14792 307 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 NPIPB7O75200 414 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 MFN2O95140 757 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 PNMTP11086 282 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 ADAM8P78325 824 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 DMTNQ08495 405 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 KLF10Q13118 480 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 REP15Q6BDI9 236 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 SSX8Q7RTT4 187 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 P2RY8Q86VZ1 359 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 SLC26A7Q8TE54 656 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 SLC47A1Q96FL8 570 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 TMEM204Q9BSN7 226 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 RSPO3Q9BXY4 272 aaPredicted RBP14.3□□□□□ -0.12
CPSF6-203ENST00000456847 PIF1Q9H611 641 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 KAT8Q9H7Z6 458 aaKnown RBP14.3□□□□□ -0.12
CPSF6-203ENST00000456847 EVA1AQ9H8M9 152 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 RASD1Q9Y272 281 aa14.3□□□□□ -0.12
CPSF6-203ENST00000456847 BBIP1A8MTZ0 92 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 M0R3H8 397 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 MRASO14807 208 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 ARHGEF9O43307 516 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 KRT33AO76009 404 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 VAMP5O95183 116 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 PCGF2P35227 344 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 PCBP3P57721 371 aaKnown RBP14.29□□□□□ -0.12
CPSF6-203ENST00000456847 IL1RL1Q01638 556 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 BSPH1Q075Z2 132 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 INTS11Q5TA45 600 aaKnown RBP14.29□□□□□ -0.12
CPSF6-203ENST00000456847 TSPO2Q5TGU0 170 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 ULK3Q6PHR2 472 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 C5orf46Q6UWT4 87 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 NET1Q7Z628 596 aaPredicted RBP14.29□□□□□ -0.12
CPSF6-203ENST00000456847 OR52N5Q8NH56 324 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 TMEM171Q8WVE6 324 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 KTI12Q96EK9 354 aaPredicted RBP14.29□□□□□ -0.12
CPSF6-203ENST00000456847 PERPQ96FX8 193 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 ZNF385AQ96PM9 386 aaKnown RBP14.29□□□□□ -0.12
CPSF6-203ENST00000456847 TMUB1Q9BVT8 246 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 SLCO5A1Q9H2Y9 848 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 SAR1AQ9NR31 198 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 SLC7A10Q9NS82 523 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 ITGA5P08648 1049 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 HOXC12P31275 282 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 EGR4Q05215 589 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 OR1Q1Q15612 314 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 FAM91A1Q658Y4 838 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 ADAM5Q6NVV9 412 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 PATL1Q86TB9 770 aaKnown RBP14.29□□□□□ -0.12
CPSF6-203ENST00000456847 SNX32Q86XE0 403 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 WFDC11Q8NEX6 87 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 SH3GL1Q99961 368 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 PTDSS2Q9BVG9 487 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 CCDC134Q9H6E4 229 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 KLHL14Q9P2G3 628 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 CAPN7Q9Y6W3 813 aa14.29□□□□□ -0.12
CPSF6-203ENST00000456847 A0A1W2PR80 420 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 M0QX08 132 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 OR2T1O43869 369 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms