RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 SLC38A4Q969I6 547 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 S100PBPQ96BU1 408 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 CMTM5Q96DZ9 223 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 USB1Q9BQ65 265 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 SF3B5Q9BWJ5 86 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 RSPO3Q9BXY4 272 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 CIB4A0PJX0 185 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 AQP7P3A6NL99 342 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 CCT8L1PA6NM43 557 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 TMEM229AB2RXF0 380 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 FXYD1O00168 92 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 GCM2O75603 506 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 VAMP5O95183 116 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 CNOT4O95628 575 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 IGHV3-9P01782 118 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 IL1RL1Q01638 556 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 VEZF1Q14119 521 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 CCDC80Q76M96 950 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 ARPINQ7Z6K5 226 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 CALHM3Q86XJ0 350 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 C10orf53Q8N6V4 93 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 OR2T12Q8NG77 320 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 TAMM41Q96BW9 452 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 ZNF583Q96ND8 569 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 EPYCQ99645 322 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 ARHGDIGQ99819 225 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 HOPXQ9BPY8 73 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 NGBQ9NPG2 151 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 FLVCR1Q9Y5Y0 555 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 ABCA12Q86UK0 2595 aa16.01■□□□□ 0.15
PDLIM2-215ENST00000456545 CPSF4LA6NMK7 179 aaKnown RBP16■□□□□ 0.15
PDLIM2-215ENST00000456545 GSTA4O15217 222 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 LYZL6O75951 148 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 KRT33AO76009 404 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 CD247P20963 164 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 DRD4P21917 467 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 KEAP1Q14145 624 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 SLC17A1Q14916 467 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 STK11Q15831 433 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 C6orf89Q6UWU4 347 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 AAED1Q7RTV5 226 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 GPR32P1Q8NGA4 272 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 OR9K2Q8NGE7 335 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 HSD17B8Q92506 261 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 MUCL1Q96DR8 90 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 KTI12Q96EK9 354 aaPredicted RBP16■□□□□ 0.15
PDLIM2-215ENST00000456545 LIME1Q9H400 295 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 ASB6Q9NWX5 421 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 ST6GALNAC2Q9UJ37 374 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 BAG5Q9UL15 447 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 RASD1Q9Y272 281 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 SH3GLB1Q9Y371 365 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 TEX15Q9BXT5 2789 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 FBN2P35556 2912 aa16■□□□□ 0.15
PDLIM2-215ENST00000456545 CREBBPQ92793 2442 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 ANKHD1Q8IWZ3 2542 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 TRAV36DV7A0A075B6V5 113 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 A0A087WUJ7 227 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 A0A1B0GX12 115 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 ELOVL7A1L3X0 281 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 FAM220BPB1ANY3 271 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 SNX3O60493 162 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 FMO6PO60774 539 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 NPIPB7O75200 414 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 GGT1P19440 569 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 CBLP22681 906 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 CDH12P55289 794 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 EGR4Q05215 589 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 FAPQ12884 760 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 C1DQ13901 141 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 NRF1Q16656 503 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 LRRC23Q53EV4 343 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 BEX5Q5H9J7 111 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 ENTPD8Q5MY95 495 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 FAM69AQ5T7M9 428 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 ZNF613Q6PF04 617 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 C22orf34Q6ZV56 151 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 P3H2Q8IVL5 708 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 MICU2Q8IYU8 434 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 OR6T1Q8NGN1 323 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 TAAR8Q969N4 342 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 WFDC6Q9BQY6 131 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 USP22Q9UPT9 525 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 PLEKHA6Q9Y2H5 1048 aa15.99■□□□□ 0.15
PDLIM2-215ENST00000456545 DEFB108AA8MXU0 73 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 NDUFAB1O14561 156 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 TPST2O60704 377 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 THBDP07204 575 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 NQO1P15559 274 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 ZNF43P17038 809 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 IGHV1-2P23083 117 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 EDNRAP25101 427 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 NUDT2P50583 147 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 MFSD13AQ14CX5 517 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 FREM1Q5H8C1 2179 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 TTC33Q6PID6 262 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 TREML1Q86YW5 311 aa15.98■□□□□ 0.15
PDLIM2-215ENST00000456545 NINJ1Q92982 152 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms