RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RPS5P46782 204 aaKnown RBP24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 PIN1Q13526 163 aaPredicted RBP24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 GDF7Q7Z4P5 450 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 P3H2Q8IVL5 708 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 CCDC103Q8IW40 242 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 ACBD4Q8NC06 268 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 TAAR8Q969N4 342 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 SLC7A6OSQ96CW6 309 aaPredicted RBP24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 MPP4Q96JB8 637 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 PRSS27Q9BQR3 290 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 TACO1Q9BSH4 297 aaKnown RBP24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 ZNF426Q9BUY5 554 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 RIMS3Q9UJD0 308 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 ASH1LQ9NR48 2969 aaKnown RBP24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 TRAV36DV7A0A075B6V5 113 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 IGKV3D-15A0A087WSY6 115 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 ZNF716A6NP11 495 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 OR2T1O43869 369 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 RAMP1O60894 148 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 IFNW1P05000 195 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 TAS2R41P59536 307 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 BNIP1Q12981 228 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 TMEM201Q5SNT2 666 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 FAM69AQ5T7M9 428 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 LUZP2Q86TE4 346 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 TMEM99Q8N816 258 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 OR6S1Q8NH40 331 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 PIGXQ8TBF5 258 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 RNASE6Q93091 150 aaKnown RBP24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 ENKD1Q9H0I2 346 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 A4GNTQ9UNA3 340 aa24.91■■□□□ 1.58
SMARCC1-203ENST00000454240 ZNF724A8MTY0 619 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 SMNDC1O75940 238 aaKnown RBP eCLIP24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 AKR7A3O95154 331 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 THRBP10828 461 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 IGFBP2P18065 325 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 SLC16A1P53985 500 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 OTUD3Q5T2D3 398 aaPredicted RBP24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 NSMCE2Q96MF7 247 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 ZNF300Q96RE9 604 aaPredicted RBP24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 EPYCQ99645 322 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 ACTR3BQ9P1U1 418 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 FOXD3Q9UJU5 478 aaPredicted RBP24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 PROCRQ9UNN8 238 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 HECTD1Q9ULT8 2610 aa24.9■■□□□ 1.58
SMARCC1-203ENST00000454240 FREM1Q5H8C1 2179 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 AQP7P3A6NL99 342 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 P2RY4P51582 365 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 HIST2H2BCQ6DN03 193 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 TTC33Q6PID6 262 aaPredicted RBP24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 NUFIP2Q7Z417 695 aaKnown RBP24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 TSEN54Q7Z6J9 526 aaKnown RBP24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 FAM86B1Q8N7N1 296 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 ZNF610Q8N9Z0 462 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 SLC25A36Q96CQ1 311 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 LRRC46Q96FV0 321 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 PRRC1Q96M27 445 aa24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 OPN3Q9H1Y3 402 aaPredicted RBP24.89■■□□□ 1.58
SMARCC1-203ENST00000454240 GYG2O15488 501 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 PDE5AO76074 875 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 PTNP21246 168 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 TRIM25Q14258 630 aaKnown RBP24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 ZNF474Q6S9Z5 364 aaPredicted RBP24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 NKAIN4Q8IVV8 208 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 PYURFQ96I23 114 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 BTBD10Q9BSF8 475 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 THTPAQ9BU02 230 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 RBM24Q9BX46 236 aaKnown RBP24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 MUC13Q9H3R2 512 aa24.88■■□□□ 1.57
SMARCC1-203ENST00000454240 FFAR1O14842 300 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 BGLAPP02818 100 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 YAP1P46937 504 aaKnown RBP24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 LTBQ06643 244 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 SLC17A1Q14916 467 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 DNAL1Q4LDG9 190 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 ZNF775Q96BV0 537 aaPredicted RBP24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 CLPTM1LQ96KA5 538 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 C7orf34Q96L11 122 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 SPOCK3Q9BQ16 436 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 SLC19A3Q9BZV2 496 aa24.87■■□□□ 1.57
SMARCC1-203ENST00000454240 J3KTA2 159 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 GPR171O14626 319 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 PRSS23O95084 383 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 UQCRC1P31930 480 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 RBM34P42696 430 aaKnown RBP24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 MS4A2Q01362 244 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 ST3GAL3Q11203 375 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 MFSD13AQ14CX5 517 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 SF3B5Q9BWJ5 86 aaKnown RBP24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 C12orf49Q9H741 205 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 GALNT8Q9NY28 637 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 EMC3Q9P0I2 261 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 ENPP4Q9Y6X5 453 aa24.86■■□□□ 1.57
SMARCC1-203ENST00000454240 NBPF19A0A087WUL8 3843 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 VAMP5O95183 116 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 SEMG1P04279 462 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 IFNA8P32881 189 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 PCYT1AP49585 367 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 TMEM225Q6GV28 225 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 GALNT5Q7Z7M9 940 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms