RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 YTHDF3Q7Z739 585 aaKnown RBP9.42□□□□□ -0.9
DDX39A-203ENST00000454233 DHDDSQ86SQ9 333 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 ATG4DQ86TL0 474 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-203ENST00000454233 BIVMQ86UB2 503 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 GPAT4Q86UL3 456 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 BHLHE22Q8NFJ8 381 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-203ENST00000454233 ELOA3Q8NG57 546 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 OR9K2Q8NGE7 335 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 TMEM45BQ96B21 275 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 SELENONQ9NZV5 590 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 LAMP3Q9UQV4 416 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 ANGPT4Q9Y264 503 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 NDUFAF1Q9Y375 327 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-203ENST00000454233 ACANP16112 2415 aa9.42□□□□□ -0.9
DDX39A-203ENST00000454233 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-203ENST00000454233 DPRXA6NFQ7 191 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 TMEM229AB2RXF0 380 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 KRT33AO76009 404 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 INHBBP09529 407 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 CYP51A1Q16850 503 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 ZNF672Q499Z4 452 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-203ENST00000454233 RUNDC3AQ59EK9 446 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 METTL21CQ5VZV1 264 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 KLHL17Q6TDP4 642 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 C5orf46Q6UWT4 87 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 SEZ6L2Q6UXD5 910 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 TMEM108Q6UXF1 575 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 DLEU7Q6UYE1 221 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 ABHD12BQ7Z5M8 362 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-203ENST00000454233 POMGNT2Q8NAT1 580 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 C11orf65Q8NCR3 313 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 HIPK4Q8NE63 616 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 KBTBD8Q8NFY9 601 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 OR52E4Q8NGH9 312 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 OR52N5Q8NH56 324 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 MFSD8Q8NHS3 518 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 RNF217Q8TC41 542 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 TSPEARQ8WU66 669 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 DNAJA4Q8WW22 397 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-203ENST00000454233 SLC25A36Q96CQ1 311 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 TRMT61AQ96FX7 289 aaKnown RBP9.41□□□□□ -0.9
DDX39A-203ENST00000454233 RADILQ96JH8 1075 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 Q96MF0 132 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 CPPED1Q9BRF8 314 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-203ENST00000454233 BDH2Q9BUT1 245 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 TRIM2Q9C040 744 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 SLCO5A1Q9H2Y9 848 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 IKZF5Q9H5V7 419 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 EVA1AQ9H8M9 152 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 C12orf10Q9HB07 376 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 SLC7A10Q9NS82 523 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 MGAT4BQ9UQ53 548 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 RASD1Q9Y272 281 aa9.41□□□□□ -0.9
DDX39A-203ENST00000454233 A0A1B0GWA3 101 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 FAM171A2A8MVW0 826 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ABCD4O14678 606 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 OR2T1O43869 369 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 NPIPB7O75200 414 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 SASH3O75995 380 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ITGA5P08648 1049 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 TROVE2P10155 538 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 PNMTP11086 282 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 PAX1P15863 534 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 PTAFRP25105 342 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 MPGP29372 298 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 AQP1P29972 269 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 RPS5P46782 204 aaKnown RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ZNF83P51522 516 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ATP5J2P56134 94 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 RGS8P57771 180 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 RBBP4Q09028 425 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 NFYCQ13952 458 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 GABRA6Q16445 453 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ALG10BQ5I7T1 473 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 TSPO2Q5TGU0 170 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 C9orf135Q5VTT2 229 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 LSRQ86X29 649 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ARMC8Q8IUR7 673 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 C10orf111Q8N326 155 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 C17orf78Q8N4C9 275 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 DPP10Q8N608 796 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 LSMEM1Q8N8F7 131 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 C1orf162Q8NEQ5 155 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 LILRB1Q8NHL6 650 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 SMAP2Q8WU79 429 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 IGFBPL1Q8WX77 278 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 NEUROG1Q92886 237 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 SLC38A4Q969I6 547 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 GTPBP3Q969Y2 492 aaKnown RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 SLC47A1Q96FL8 570 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ANKRD27Q96NW4 1050 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 MUS81Q96NY9 551 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ZNF385AQ96PM9 386 aaKnown RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 CGREF1Q99674 301 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 GSX1Q9H4S2 264 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms