RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 RSC1A1Q92681 617 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 MS4A8Q9BY19 250 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 POLHQ9Y253 713 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 TRABD2BA6NFA1 517 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 TMPRSS11DO60235 418 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 SLC43A1O75387 559 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 UBL4AP11441 157 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 HNRNPA2B1P22626 353 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 NFYAP23511 347 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 RAB4BP61018 213 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 C3orf38Q5JPI3 329 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 FAM69AQ5T7M9 428 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 FAM83HQ6ZRV2 1179 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 LSRQ86X29 649 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 PTGES2Q9H7Z7 377 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 A0A1B0GWA3 101 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 H0YGG7 62 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 RAB3AP20336 220 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 SIRPAP78324 504 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 HNRNPA1L2Q32P51 320 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 SLC25A35Q3KQZ1 300 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 UBE2NLQ5JXB2 153 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LINC01465Q8N7H1 131 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 OR52I2Q8NH67 350 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 FOXRED1Q96CU9 486 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 PRMT8Q9NR22 394 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 SIDT1Q9NXL6 827 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 KCNE3Q9Y6H6 103 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 RPS10-NUDT3A0A1W2PQS6 291 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 A6NLC8 198 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ZNF705FA8MVS1 300 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 B4DXG7 233 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 HMGN4O00479 90 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 PEX14O75381 377 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LCATP04180 440 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ZNF705DP0CH99 300 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 ZNF705BP0CI00 300 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 PSMB1P20618 241 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 CCR2P41597 374 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 RPS10P46783 165 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 ACTBP60709 375 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ACTG1P63261 375 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 POU3F1Q03052 451 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 DLX2Q07687 328 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 DSC1Q08554 894 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 GGTA1PQ4G0N0 100 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LRIF1Q5T3J3 769 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 MCATQ8IVS2 390 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 PM20D2Q8IYS1 436 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 OR56B4Q8NH76 319 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 HOXB13Q92826 284 aaPredicted RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 ZNF385DQ9H6B1 395 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ZNF160Q9HCG1 818 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 APMAPQ9HDC9 416 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 SLC2A4RGQ9NR83 387 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 PCDHGA1Q9Y5H4 931 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 PUS1Q9Y606 427 aaKnown RBP eCLIP7.18□□□□□ -1.26
RIF1-206ENST00000453091 H0YIV9 168 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LATS1O95835 1130 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 WDPCPO95876 746 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 TMUB2Q71RG4 321 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 RAB11FIP2Q7L804 512 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LIX1LQ8IVB5 337 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ADGRF3Q8IZF5 1079 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 OR51S1Q8NGJ8 323 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 PDXPQ96GD0 296 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LRIG1Q96JA1 1093 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 MAP6Q96JE9 813 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ALG12Q9BV10 488 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 B3GAT2Q9NPZ5 323 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 HINT3Q9NQE9 182 aaKnown RBP7.18□□□□□ -1.26
RIF1-206ENST00000453091 SLC6A14Q9UN76 642 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 TACR3P29371 465 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 MAGEB1P43366 347 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 MBOAT2Q6ZWT7 520 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 HAVCR2Q8TDQ0 301 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 RAB7BQ96AH8 199 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 SLC35A4Q96G79 324 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 SULT4A1Q9BR01 284 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 CRB3Q9BUF7 120 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 LRFN1Q9P244 771 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 ICKQ9UPZ9 632 aa7.18□□□□□ -1.26
RIF1-206ENST00000453091 A0A087WUU8 490 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 LILRB3O75022 631 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 AGERQ15109 404 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 ZNF417Q8TAU3 575 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 TSSK2Q96PF2 358 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 PLEKHJ1Q9NW61 149 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 TMEFF2Q9UIK5 374 aaPredicted RBP7.17□□□□□ -1.26
RIF1-206ENST00000453091 TMEM221A6NGB7 291 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 CTNSO60931 367 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 ALX3O95076 343 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 ACHEP22303 614 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 LIM2P55344 173 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 HSD11B2P80365 405 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 S100A12P80511 92 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 ESCO2Q56NI9 601 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 CYHR1Q6ZMK1 362 aa7.17□□□□□ -1.26
RIF1-206ENST00000453091 NLRC3Q7RTR2 1065 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms