RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 DCUN1D2Q6PH85 259 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 SASS6Q6UVJ0 657 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ASRGL1Q7L266 308 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 GKN2Q86XP6 184 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 DDHD1Q8NEL9 900 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 STEAP2Q8NFT2 490 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 OR6C4Q8NGE1 309 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 OR5M9Q8NGP3 310 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 PNPT1Q8TCS8 783 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 SMAP2Q8WU79 429 aaPredicted RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 LIPHQ8WWY8 451 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 NTAN1Q96AB6 310 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 GIMAP5Q96F15 307 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ATXN7L3BQ96GX2 97 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 VSTM2LQ96N03 204 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CCT7Q99832 543 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 WRAP53Q9BUR4 548 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ALG12Q9BV10 488 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 RBM24Q9BX46 236 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 RAB11FIP5Q9BXF6 653 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 GSDMCQ9BYG8 508 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 KAT8Q9H7Z6 458 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CHMP5Q9NZZ3 219 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ADAM22Q9P0K1 906 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CLEC4AQ9UMR7 237 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 B9D1Q9UPM9 204 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 MRPS7Q9Y2R9 242 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 NAALAD2Q9Y3Q0 740 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ZFC3H1O60293 1989 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 COL27A1Q8IZC6 1860 aaPredicted RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 BSNQ9UPA5 3926 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CACNA1GO43497 2377 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 KIF26BQ2KJY2 2108 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 ANKRD11Q6UB99 2663 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 GSAPA4D1B5 854 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 OR5H15A6NDH6 313 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 NKX6-3A6NJ46 265 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 SIGLEC16A6NMB1 481 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 WASHC1A8K0Z3 465 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 A8MU76 341 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 SGK494L7N484 410 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 ARPC1BO15143 372 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 NUDT21O43809 227 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 TNFSF15O95150 251 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 NXPH2O95156 264 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 NDUFA7O95182 113 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 NADKO95544 446 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 TNFP01375 233 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 RPLP0P05388 317 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 SP1P08047 785 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 CD48P09326 243 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 GIMD1P0DJR0 217 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 HTR2AP28223 471 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 CHI3L1P36222 383 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 LEPRP48357 1165 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 RGS4P49798 205 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 PFN3P60673 137 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 TNFRSF17Q02223 184 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 SRYQ05066 204 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 BCL2L1Q07817 233 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 C1orf61Q13536 156 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 PEX6Q13608 980 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 RBBP5Q15291 538 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 IRF4Q15306 451 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 ZMYND11Q15326 602 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 PARP6Q2NL67 630 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 HKDC1Q2TB90 917 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 KLHL40Q2TBA0 621 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 NEPROQ6NW34 567 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 WASH2PQ6VEQ5 465 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 LRRC70Q7Z2Q7 622 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 PHF13Q86YI8 300 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 CDH26Q8IXH8 852 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 CCDC36Q8IYA8 594 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 JOSD2Q8TAC2 188 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 RDH11Q8TC12 318 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 HCAR2Q8TDS4 363 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 GATAD1Q8WUU5 269 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 TUBGCP3Q96CW5 907 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 WBP1Q96G27 269 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF641Q96N77 438 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 MCEEQ96PE7 176 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 SECISBP2Q96T21 854 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 KLF6Q99612 283 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 CNPY3Q9BT09 278 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 DCTN5Q9BTE1 182 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 LRRC40Q9H9A6 602 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 MEAF6Q9HAF1 191 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 PLEKHA3Q9HB20 300 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 ASCL3Q9NQ33 180 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 SAMSN1Q9NSI8 373 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 PARVAQ9NVD7 372 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 FZR1Q9UM11 496 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 MRPS33Q9Y291 106 aaKnown RBP3.67□□□□□ -1.82
LINC00393-202ENST00000452852 MAB21L2Q9Y586 359 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 FKBP7Q9Y680 259 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 ACACAQ13085 2346 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 KNL1Q8NG31 2342 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms