RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MAL2Q969L2 176 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 EBF4Q9BQW3 602 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 SF3B5Q9BWJ5 86 aaKnown RBP11.35□□□□□ -0.59
CHD3-206ENST00000452447 BCL2L10Q9HD36 194 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 A4GALTQ9NPC4 353 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 ADPRHL2Q9NX46 363 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 POU2F3Q9UKI9 436 aa11.35□□□□□ -0.59
CHD3-206ENST00000452447 MAGED1Q9Y5V3 778 aaPredicted RBP11.35□□□□□ -0.59
CHD3-206ENST00000452447 A0A1W2PR80 420 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 AQP7P3A6NL99 342 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 SHISA9B4DS77 424 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 OVOL3O00110 214 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 NR5A2O00482 541 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 PRG2P13727 222 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 PTAFRP25105 342 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 CDKN1AP38936 164 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 ZNF83P51522 516 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 CDH11P55287 796 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 ETFDHQ16134 617 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 GABRA6Q16445 453 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 PGGHGQ32M88 737 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 C9orf135Q5VTT2 229 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 SLC22A25Q6T423 547 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 SERPINA11Q86U17 422 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 LSRQ86X29 649 aaPredicted RBP11.34□□□□□ -0.59
CHD3-206ENST00000452447 DEPDC4Q8N2C3 294 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 OR9K2Q8NGE7 335 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 BBS10Q8TAM1 723 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 SPDL1Q96EA4 605 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 CCDC28BQ9BUN5 200 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 SLC7A10Q9NS82 523 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 MGAT4BQ9UQ53 548 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
CHD3-206ENST00000452447 VAMP5O95183 116 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 ITGA5P08648 1049 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 BMP2P12643 396 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 PPIBP23284 216 aaKnown RBP11.33□□□□□ -0.6
CHD3-206ENST00000452447 TSPO2Q5TGU0 170 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 C1orf140Q5VVS0 124 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 AAED1Q7RTV5 226 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 FUNDC1Q8IVP5 155 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 POMGNT2Q8NAT1 580 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 SLC35B4Q969S0 331 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 TMEM45BQ96B21 275 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 C3orf49Q96BT1 292 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 SLAMF8Q9P0V8 285 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 RPS6KB2Q9UBS0 482 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 CHST2Q9Y4C5 530 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 RTTNQ86VV8 2226 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 M0R1B8 84 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 FRS3O43559 492 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 KRT33AO76009 404 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 AHSA1O95433 338 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 ETS2P15036 469 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 CD40P25942 277 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 MPGP29372 298 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
CHD3-206ENST00000452447 VEZF1Q14119 521 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 TTMPQ5BVD1 217 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 LRIF1Q5T3J3 769 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 GCNT6Q5T4J0 391 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 AGAP6Q5VW22 663 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 ABHD12BQ7Z5M8 362 aaPredicted RBP11.33□□□□□ -0.6
CHD3-206ENST00000452447 KRT73Q86Y46 540 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 C17orf78Q8N4C9 275 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 C1orf162Q8NEQ5 155 aaPredicted RBP11.33□□□□□ -0.6
CHD3-206ENST00000452447 NFKBIDQ8NI38 313 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 STK35Q8TDR2 534 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 SLC25A36Q96CQ1 311 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 SPATA5L1Q9BVQ7 753 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 C1QTNF6Q9BXI9 259 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 SLCO5A1Q9H2Y9 848 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 PIF1Q9H611 641 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 INTS9Q9NV88 658 aaKnown RBP11.33□□□□□ -0.6
CHD3-206ENST00000452447 TMEM45AQ9NWC5 275 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 SLC25A37Q9NYZ2 338 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 CORO2BQ9UQ03 480 aa11.33□□□□□ -0.6
CHD3-206ENST00000452447 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
CHD3-206ENST00000452447 EVPLLA8MZ36 301 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 PDLIM1O00151 329 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 HOXB9P17482 250 aaPredicted RBP11.32□□□□□ -0.6
CHD3-206ENST00000452447 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
CHD3-206ENST00000452447 GTF2E2P29084 291 aaKnown RBP11.32□□□□□ -0.6
CHD3-206ENST00000452447 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
CHD3-206ENST00000452447 HOXC5Q00444 222 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 CDK6Q00534 326 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 TNK1Q13470 666 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 AGKQ53H12 422 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 PAGE3Q5JUK9 113 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 KLHL24Q6TFL4 600 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
CHD3-206ENST00000452447 HS6ST2Q96MM7 605 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms