RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SLX1AQ9BQ83 275 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 MED18Q9BUE0 208 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 YIPF2Q9BWQ6 316 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 RPS6KB2Q9UBS0 482 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 PADI1Q9ULC6 663 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 UGT2A1Q9Y4X1 527 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 NBEAQ8NFP9 2946 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 IQCMA0A1B0GVH7 501 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 ISPDA4D126 451 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 SYNDIG1LA6NDD5 238 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 RIIAD1A6NNX1 92 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 PRR23D1E9PI22 279 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 MEN1O00255 615 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 EFSO43281 561 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 AKAP8O43823 692 aaKnown RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 CDRT1O95170 752 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 PRR23D2P0DMB1 279 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 WT1P19544 449 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 F8A1P23610 371 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 FGF9P31371 208 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 SLC6A6P31641 620 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 ATP6V1E1P36543 226 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 ZNF385CQ66K41 422 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 FCRLBQ6BAA4 426 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 VASNQ6EMK4 673 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 RHBDD2Q6NTF9 364 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 RTL4Q6ZR62 310 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 DNAJA4Q8WW22 397 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 MR1Q95460 341 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 NACC2Q96BF6 587 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 C3orf49Q96BT1 292 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 C1GALT1C1Q96EU7 318 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 KCTD7Q96MP8 289 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 TM9SF2Q99805 663 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 NDC1Q9BTX1 674 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 NXF5Q9H1B4 397 aaKnown RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 ABCB10Q9NRK6 738 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 SSUH2Q9Y2M2 353 aa9.78□□□□□ -0.84
PKP4-206ENST00000452162 CAB39Q9Y376 341 aaPredicted RBP9.78□□□□□ -0.84
PKP4-206ENST00000452162 ITPR1Q14643 2758 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 TRDV1A0A1B0GX56 115 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 TCRBV16S1A1N1A0A5B0 115 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 FRG2CA6NGY1 282 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SLC22A31A6NKX4 558 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 A8MUA0 341 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 GNB5O14775 395 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 TBX1O43435 398 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 OIP5O43482 229 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 PEPDP12955 493 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 HK1P19367 917 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 FBLP22087 321 aaKnown RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 PAICSP22234 425 aaKnown RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 NOS3P29474 1203 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CRMP1Q14194 572 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CD226Q15762 336 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 STEAP3Q658P3 488 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ARHGAP11AQ6P4F7 1023 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ZNF517Q6ZMY9 492 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 ACBD7Q8N6N7 88 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ARIH2OSQ8N7S6 290 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 FAM83FQ8NEG4 500 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ZNF721Q8TF20 911 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ADIPOR1Q96A54 375 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SGTBQ96EQ0 304 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 LRFN5Q96NI6 719 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ARPC5LQ9BPX5 153 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 HOXD1Q9GZZ0 328 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 MKKSQ9NPJ1 570 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CHRNA9Q9UGM1 479 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 IL17BQ9UHF5 180 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CACNA1GO43497 2377 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ATMQ13315 3056 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 C12orf71A8MTZ7 269 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 KLK3P07288 261 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 CLEC2LP0C7M8 214 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 GAAP10253 952 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 LIFP15018 202 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ZNF3P17036 446 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 TCN2P20062 427 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 TNFSF8P32971 234 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 RANBP1P43487 201 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 TGM4P49221 684 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 BDH1Q02338 343 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 MXD1Q05195 221 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 DBPQ10586 325 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 SKP2Q13309 424 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 DNASE1L3Q13609 305 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ELAVL1Q15717 326 aaKnown RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 KLHL12Q53G59 568 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SPANXN2Q5MJ10 180 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SLC22A16Q86VW1 577 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SYT14Q8NB59 555 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CT55Q8WUE5 264 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 LCORQ96JN0 433 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 WDFY2Q96P53 400 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 CCNL2Q96S94 520 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms