RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ABCD4O14678 606 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 KRT33AO76009 404 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 AHSA1O95433 338 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 ITGA5P08648 1049 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 BMP2P12643 396 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 HTR2AP28223 471 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 HOXC12P31275 282 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 CDKN1AP38936 164 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 PTH2RP49190 550 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 SLC16A1P53985 500 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 CDH11P55287 796 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 RGS8P57771 180 aaPredicted RBP8.53□□□□□ -1.04
USP54-207ENST00000451492 LGALS3BPQ08380 585 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 SLC17A1Q14916 467 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 PDK3Q15120 406 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 RUNDC3AQ59EK9 446 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 TSPO2Q5TGU0 170 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 TMEM225Q6GV28 225 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 PAQR6Q6TCH4 344 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 SEZ6L2Q6UXD5 910 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 AAED1Q7RTV5 226 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 ARMC8Q8IUR7 673 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 KDM8Q8N371 416 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 OR9K2Q8NGE7 335 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 KTI12Q96EK9 354 aaPredicted RBP8.53□□□□□ -1.04
USP54-207ENST00000451492 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
USP54-207ENST00000451492 ALKBH3Q96Q83 286 aaPredicted RBP8.53□□□□□ -1.04
USP54-207ENST00000451492 ZNF607Q96SK3 696 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 SPATA5L1Q9BVQ7 753 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 ZNF385DQ9H6B1 395 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 BCL2L10Q9HD36 194 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 SLC7A10Q9NS82 523 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 FGFR1OP2Q9NVK5 253 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 TAS2R16Q9NYV7 291 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 POU2F3Q9UKI9 436 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 FLNAP21333 2647 aaKnown RBP8.53□□□□□ -1.04
USP54-207ENST00000451492 A0A1B0GWA3 101 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 TRIM64A6NGJ6 449 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 TRIM64BA6NI03 449 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 OR5H1A6NKK0 313 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 ARHGEF9O43307 516 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 VIMP08670 466 aaKnown RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 TROVE2P10155 538 aaKnown RBP eCLIP8.52□□□□□ -1.05
USP54-207ENST00000451492 PNMTP11086 282 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 ETS2P15036 469 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 PRKAR1BP31321 381 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 SELENOPP49908 381 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 RIPPLY3P57055 190 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 RPS4XP62701 263 aaKnown RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 H3F3AP84243 136 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 GUCY1A3Q02108 690 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 DMTNQ08495 405 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 ZSWIM7Q19AV6 140 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 ZNF672Q499Z4 452 aaPredicted RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 ALG10BQ5I7T1 473 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 TIMM23BQ5SRD1 257 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 SHEQ5VZ18 495 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 CGB2Q6NT52 195 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 DLEU7Q6UYE1 221 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 PTOV1Q86YD1 416 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 ZNF611Q8N823 705 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 HIPK4Q8NE63 616 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 LILRB1Q8NHL6 650 aaPredicted RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 VANGL1Q8TAA9 524 aaPredicted RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 GTPBP3Q969Y2 492 aaKnown RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 ANKRD27Q96NW4 1050 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 CGREF1Q99674 301 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 PIP5K1AQ99755 562 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 WFDC6Q9BQY6 131 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 TMEM204Q9BSN7 226 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 HEATR1Q9H583 2144 aaKnown RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 CXorf56Q9H5V9 222 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 ZNF446Q9NWS9 450 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 SELENONQ9NZV5 590 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 MALT1Q9UDY8 824 aa8.52□□□□□ -1.05
USP54-207ENST00000451492 TESQ9UGI8 421 aaKnown RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 MAGED1Q9Y5V3 778 aaPredicted RBP8.52□□□□□ -1.05
USP54-207ENST00000451492 PRORSD1PA6NEY8 169 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 CPSF4LA6NMK7 179 aaKnown RBP8.51□□□□□ -1.05
USP54-207ENST00000451492 H7C1Q1 480 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 M0R082 166 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 SERPINI2O75830 405 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 CNOT4O95628 575 aaKnown RBP8.51□□□□□ -1.05
USP54-207ENST00000451492 SOD3P08294 240 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 GPX2P18283 190 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 P2RY4P51582 365 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 MAP2K6P52564 334 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ARFIP2P53365 341 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ATP5J2P56134 94 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 IRX1P78414 480 aaPredicted RBP8.51□□□□□ -1.05
USP54-207ENST00000451492 SLC25A3Q00325 362 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 EGR4Q05215 589 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ADRM1Q16186 407 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 GABRA6Q16445 453 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 MMEL1Q495T6 779 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 HIKESHIQ53FT3 197 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 DHRS4L2Q6PKH6 230 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 SLC22A25Q6T423 547 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 RANBP3LQ86VV4 465 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms