RNA–Protein interactions for RNA: ENST00000448979.3

AC023509.3-201, humanhuman

TSL 1 (best)

Gene AC023509.3, Length 1,406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023509.3-201ENST00000448979 TFPIP10646 304 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 HOXB6P17509 224 aaKnown RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 GCKP35557 465 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 MAGEA2P43356 314 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 HTR3AP46098 478 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 LHX2P50458 406 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 GFRA1P56159 465 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 PRSS12P56730 875 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 CLDN15P56746 228 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 ST3GAL3Q11203 375 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 TRAM2Q15035 370 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 GLYR1Q49A26 553 aaPredicted RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 NSUN5P2Q63ZY6 315 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 OR2T5Q6IEZ7 315 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 ZFP1Q6P2D0 407 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 ATG4DQ86TL0 474 aaPredicted RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 UBQLNLQ8IYU4 475 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 OFCC1Q8IZS5 231 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 GTPBP8Q8N3Z3 284 aaPredicted RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 OR2T29Q8NH02 315 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 LINC01560Q8TB33 94 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 DUS3LQ96G46 650 aaKnown RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 ADAM19Q9H013 955 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 ARMC1Q9NVT9 282 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 ZNF337Q9Y3M9 751 aa11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 HRNRQ86YZ3 2850 aaPredicted RBP11.23□□□□□ -0.61
AC023509.3-201ENST00000448979 TMEM72A0PK05 275 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 CLCA1A8K7I4 914 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 HSPB2A8KAH6 182 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 H3BNX3 289 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 CLOCKO15516 846 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 CHP2O43745 196 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 EFNA2O43921 213 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 PRSS23O95084 383 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 GADD45GO95257 159 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 LYPD3O95274 346 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 TGM6O95932 706 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 PNMTP11086 282 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 FASP25445 335 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SFTPDP35247 375 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 APOBEC1P41238 236 aaKnown RBP11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 CLDN18P56856 261 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 HSPB2Q16082 182 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SLC25A53Q5H9E4 307 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 WDR88Q6ZMY6 472 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 AMIGO2Q86SJ2 522 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 ADGRG3Q86Y34 549 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 PIK3C3Q8NEB9 887 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 TMEM255BQ8WV15 326 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SLC38A4Q969I6 547 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 INTS12Q96CB8 462 aaKnown RBP11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 POLR2J2Q9GZM3 115 aaKnown RBP11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 POLR2J3Q9H1A7 115 aaKnown RBP11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SEMA6AQ9H2E6 1030 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 REEP1Q9H902 201 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 VNN3Q9NY84 501 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 CHRNA9Q9UGM1 479 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 U3KQV3 271 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 HIVEP1P15822 2718 aa11.22□□□□□ -0.61
AC023509.3-201ENST00000448979 ABCA4P78363 2273 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 C7orf72A4D263 438 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 MBD3L4A6NDZ8 208 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 MBD3L3A6NE82 208 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 MBD3L5A6NJ08 208 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 CD8B2A6NJW9 211 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 EEF1E1-BLOC1S5C9J1V9 151 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TNFRSF11BO00300 401 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 ADAMDEC1O15204 470 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 SEC14L5O43304 696 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 EEF1E1O43324 174 aaKnown RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 DEAF1O75398 565 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 E2F6O75461 281 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 IL2RAP01589 272 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 FCGR1AP12314 374 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 ZNF17P17021 662 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 ADH6P28332 368 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TIMP3P35625 211 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 IST1P53990 364 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 SMIM11AP58511 58 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 RCN1Q15293 331 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TESK1Q15569 626 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 EXOC3L2Q2M3D2 409 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TMEM44Q2T9K0 475 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TMEM176BQ3YBM2 270 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TTC33Q6PID6 262 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 TBPL2Q6SJ96 375 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 ZNF730Q6ZMV8 503 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 LUZP2Q86TE4 346 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 PM20D2Q8IYS1 436 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 LILRA2Q8N149 483 aa11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 MBD3L2Q8NHZ7 208 aaPredicted RBP11.21□□□□□ -0.61
AC023509.3-201ENST00000448979 PKP2Q99959 881 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms