RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 LIMS4P0CW20 117 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 CD59P13987 128 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 MST1P26927 711 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 MAP2K6P52564 334 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 FOXL2P58012 376 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 ACSM1Q08AH1 577 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 CRMP1Q14194 572 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 PCOLCEQ15113 449 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 QPRTQ15274 297 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 BTBD16Q32M84 506 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 KLHL12Q53G59 568 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 EMC4Q5J8M3 183 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 SLC35D3Q5M8T2 416 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 RAB11FIP2Q7L804 512 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 NANOGNBQ7Z5D8 188 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 DND1Q8IYX4 353 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 FAM98AQ8NCA5 519 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 BBS1Q8NFJ9 593 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 OR51G2Q8NGK0 314 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 STK35Q8TDR2 534 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 GPR119Q8TDV5 335 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 ELP5Q8TE02 316 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 DUSP19Q8WTR2 217 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 THAP3Q8WTV1 239 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 RNF138Q8WVD3 245 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 S100ZQ8WXG8 99 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 UFD1Q92890 307 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 RPL3LQ92901 407 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 PTP4A1Q93096 173 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 C8orf44Q96CB5 159 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 MRPL48Q96GC5 212 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 LIN37Q96GY3 246 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 SECISBP2Q96T21 854 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 TEAD3Q99594 435 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 CHCHD6Q9BRQ6 235 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 RTN4RQ9BZR6 473 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 SIAEQ9HAT2 523 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 TMEM9BQ9NQ34 198 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 PADI1Q9ULC6 663 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 STUB1Q9UNE7 303 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 SSR3Q9UNL2 185 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 CAB39Q9Y376 341 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 IER3IP1Q9Y5U9 82 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 R4GN57 208 aa9.61□□□□□ -0.87
VIPAS39-203ENST00000448935 IGHV1-45A0A0A0MS14 117 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 TMED7-TICAM2A0A0A6YYA0 188 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 TMEM200CA6NKL6 621 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 A8MVM7 634 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 MCIDASD6RGH6 385 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 CDX4O14627 284 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 TP53I11O14683 189 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PLD2O14939 933 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OR2T1O43869 369 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 CD14P08571 375 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 RAB40ALP0C0E4 278 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 JMJD7P0C870 316 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SLC2A5P22732 501 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SOX6P35712 828 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SLC16A1P53985 500 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 FBXW4P57775 412 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 BDH1Q02338 343 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 EGR4Q05215 589 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 TPBGQ13641 420 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 IL10RAQ13651 578 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SSX1Q16384 188 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 NTRK2Q16620 822 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 COL28A1Q2UY09 1125 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 ZNF829Q3KNS6 432 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 ZNF362Q5T0B9 420 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 FAM199XQ6PEV8 388 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 MAMDC2Q7Z304 686 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PHC2Q8IXK0 858 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 LRRC17Q8N6Y2 441 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 POMGNT2Q8NAT1 580 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OR4F15Q8NGB8 312 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OR52E2Q8NGJ4 325 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OR6S1Q8NH40 331 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 BORCS5Q969J3 196 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 RNF166Q96A37 237 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OR51E2Q9H255 320 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 OR51V1Q9H2C8 321 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 HMG20AQ9NP66 347 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 ERVK13-1Q9NX77 482 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 KLRF1Q9NZS2 232 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 CCDC59Q9P031 241 aaKnown RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 TMED7Q9Y3B3 224 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 PCDHGA1Q9Y5H4 931 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 B3GALT1Q9Y5Z6 326 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 SPIN1Q9Y657 262 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 A0A1W2PQ72 361 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 DAPL1A0PJW8 107 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 BLOC1S5-TXNDC5H3BN57 136 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 J3QRE1 110 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 GDF9O60383 454 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 KLF7O75840 302 aaPredicted RBP9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 STK17BO94768 372 aa9.6□□□□□ -0.87
VIPAS39-203ENST00000448935 APOL3O95236 402 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms