RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 OR6S1Q8NH40 331 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 ABHD3Q8WU67 409 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 WFDC6Q9BQY6 131 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 KLHL13Q9P2N7 655 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 FOXD3Q9UJU5 478 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 MED31Q9Y3C7 131 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 ENPP4Q9Y6X5 453 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 A1L4Q6 167 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 HTR3EA5X5Y0 456 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 SMAD9O15198 467 aaKnown RBP12.59□□□□□ -0.39
SSBP3-208ENST00000444533 SS18L1O75177 396 aaPredicted RBP12.59□□□□□ -0.39
SSBP3-208ENST00000444533 NPIPB7O75200 414 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 OR6A2O95222 327 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 FABP3P05413 133 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 UMPSP11172 480 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 IMPDH2P12268 514 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 PEX19P40855 299 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 YAP1P46937 504 aaKnown RBP12.59□□□□□ -0.39
SSBP3-208ENST00000444533 ASCL1P50553 236 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 CHRNB3Q05901 458 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 FLOT2Q14254 428 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 PDK3Q15120 406 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 TAF11Q15544 211 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 LCN8Q6JVE9 175 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 GPAT4Q86UL3 456 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 OFCC1Q8IZS5 231 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 NAXEQ8NCW5 288 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 TMEM239Q8WW34 195 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
SSBP3-208ENST00000444533 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
SSBP3-208ENST00000444533 CLPTM1LQ96KA5 538 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 ZNF347Q96SE7 839 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 CLEC4AQ9UMR7 237 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 RASD1Q9Y272 281 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 B3GALT5Q9Y2C3 310 aa12.59□□□□□ -0.39
SSBP3-208ENST00000444533 RELNP78509 3460 aa12.58□□□□□ -0.39
SSBP3-208ENST00000444533 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 hCG_2039718K7EN88 272 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 KPNA4O00629 521 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-208ENST00000444533 MSTNO14793 375 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 GSC2O15499 205 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 CIB2O75838 187 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 AKR7A3O95154 331 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 FOXF2Q12947 444 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF730Q6ZMV8 503 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 H1FNTQ75WM6 255 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-208ENST00000444533 GALNT5Q7Z7M9 940 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 LUZP2Q86TE4 346 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 KIF18BQ86Y91 864 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF100Q8IYN0 542 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 PIK3C3Q8NEB9 887 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 TAAR8Q969N4 342 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 SEPHS2Q99611 448 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 SF3B5Q9BWJ5 86 aaKnown RBP12.58□□□□□ -0.4
SSBP3-208ENST00000444533 ANKRD19PQ9H560 264 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 YY1AP1Q9H869 796 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 NANSQ9NR45 359 aa12.58□□□□□ -0.4
SSBP3-208ENST00000444533 NOSIPQ9Y314 301 aaKnown RBP12.58□□□□□ -0.4
SSBP3-208ENST00000444533 GCN1Q92616 2671 aaKnown RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 NKX2-6A6NCS4 301 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 AQP7P3A6NL99 342 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 AQP12BA6NM10 295 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 AKAP8O43823 692 aaKnown RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 MRPL33O75394 65 aaKnown RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 MT-ND1P03886 318 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 H1F0P07305 194 aaKnown RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 CD8BP10966 210 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF43P17038 809 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 AGTR1P30556 359 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 UQCRC1P31930 480 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 KIR2DL2P43627 348 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 H3F3AP84243 136 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 EGR4Q05215 589 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 PMS2P3Q13401 168 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 FGD3Q5JSP0 725 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 ABLIM2Q6H8Q1 611 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 LINC00114Q6XXX2 140 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 BEND4Q6ZU67 534 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 SPATA24Q86W54 205 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 P3H2Q8IVL5 708 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 ZDHHC21Q8IVQ6 265 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 TUSC5Q8IXB3 177 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 AQP12AQ8IXF9 295 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 RNF113BQ8IZP6 322 aaKnown RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 TMEM99Q8N816 258 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 SCAIQ8N9R8 606 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF300Q96RE9 604 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 PIP5K1AQ99755 562 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 PSD2Q9BQI7 771 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 RBM24Q9BX46 236 aaKnown RBP12.57□□□□□ -0.4
SSBP3-208ENST00000444533 UCK2Q9BZX2 261 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 NDEL1Q9GZM8 345 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 LRMDAQ9H2I8 198 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 C12orf49Q9H741 205 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms