RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TVP23AA6NH52 213 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 LRP3O75074 770 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 ENTPD6O75354 484 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 CLDN6P56747 220 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 CXADRP78310 365 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 MLC1Q15049 377 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF773Q6PK81 442 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC16A14Q7RTX9 510 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 OR5J2Q8NH18 312 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 FAM173AQ9BQD7 235 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 ANKRD19PQ9H560 264 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 BCL2L10Q9HD36 194 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 TMEM184BQ9Y519 407 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 DOCK6Q96HP0 2047 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 MT-ATP6P00846 226 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 GADD45AP24522 165 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 PEBP1P30086 187 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 RAE1P78406 368 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 MELKQ14680 651 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 FAM205BPQ63HN1 556 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 PTRH1Q86Y79 214 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 RAB33BQ9H082 229 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 PCYT1BQ9Y5K3 369 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 FKBP7Q9Y680 259 aa12.95□□□□□ -0.34
SMARCA4-204ENST00000444061 TEX13CA0A0J9YWL9 993 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 SERTM1A2A2V5 107 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 MTRF1O75570 445 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 IRF2P14316 349 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 LSSP48449 732 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 RNF165Q6ZSG1 346 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 TMEM151AQ8N4L1 468 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 OR8S1Q8NH09 359 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 PAQR5Q9NXK6 330 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 HPP00738 406 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 STSP08842 583 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 GM2AP17900 193 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 GIPRP48546 466 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 BIDP55957 195 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 KIAA0040Q15053 153 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 GLYR1Q49A26 553 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 BCL2L15Q5TBC7 163 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 PGM2L1Q6PCE3 622 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 MRPL21Q7Z2W9 205 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC15A4Q8N697 577 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 PLPP5Q8NEB5 264 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF501Q96CX3 271 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 SCARF2Q96GP6 870 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 MED28Q9H204 178 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 MYOTQ9UBF9 498 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 METTL21EPA6NDL7 271 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 PTHP01270 115 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 NAGAP17050 411 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 GFRALQ6UXV0 394 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 H1FNTQ75WM6 255 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC35D2Q76EJ3 337 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 LRRC20Q8TCA0 184 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 IFT46Q9NQC8 304 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 COMMD3Q9UBI1 195 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 VAMP5O95183 116 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 ABCD3P28288 659 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 OR8H1Q8NGG4 311 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 TMEM255BQ8WV15 326 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 ISOC1Q96CN7 298 aa12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 GPN1Q9HCN4 374 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF71Q9NQZ8 489 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-204ENST00000444061 C12orf71A8MTZ7 269 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 PRR35P0CG20 571 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 TBPL2Q6SJ96 375 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 KLBQ86Z14 1044 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 SLC35F2Q8IXU6 374 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 OR2L13Q8N349 312 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 RORCP51449 518 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 VASNQ6EMK4 673 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 ZC3H10Q96K80 434 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 A0A087WZY1 265 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 PRODHO43272 600 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 AKR7A3O95154 331 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 MSL3P1P0C860 447 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 TSPAN5P62079 268 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 SPHARQ15513 63 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF627Q7L945 461 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 CPT1CQ8TCG5 803 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 MRGPRX4Q96LA9 322 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 AMBRA1Q9C0C7 1298 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 MAGED1Q9Y5V3 778 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 ISPDA4D126 451 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 NOTOA8MTQ0 251 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 GYPBP06028 91 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 STARP49675 285 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 PUDPQ08623 228 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 ANKDD1AQ495B1 522 aa12.93□□□□□ -0.34
SMARCA4-204ENST00000444061 ZNF227Q86WZ6 799 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms