RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SPACA9Q96E40 222 aaPredicted RBP19.17■□□□□ 0.66
PTPRF-207ENST00000436724 MGLLQ99685 303 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 MRPS18AQ9NVS2 196 aaKnown RBP19.17■□□□□ 0.66
PTPRF-207ENST00000436724 H2AFY2Q9P0M6 372 aaPredicted RBP19.17■□□□□ 0.66
PTPRF-207ENST00000436724 LSM2Q9Y333 95 aaKnown RBP19.17■□□□□ 0.66
PTPRF-207ENST00000436724 PCDHGA3Q9Y5H0 932 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 PCDHGA1Q9Y5H4 931 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 IER3IP1Q9Y5U9 82 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 DKK1O94907 266 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 AQP2P41181 271 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 PTGDSP41222 190 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 LIMK1P53667 647 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 ZNF367Q7RTV3 350 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 PPP1R32Q7Z5V6 425 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 SLC37A3Q8NCC5 494 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 DACH2Q96NX9 599 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 KLHL1Q9NR64 748 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 CHRNA9Q9UGM1 479 aa19.17■□□□□ 0.66
PTPRF-207ENST00000436724 METTL15A6NJ78 407 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 HIST1H1CP16403 213 aaKnown RBP19.16■□□□□ 0.66
PTPRF-207ENST00000436724 HTR1FP30939 366 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 NTRK2Q16620 822 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 KLHL12Q53G59 568 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 NIPAL3Q6P499 406 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 ARSKQ6UWY0 536 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 NDUFAF7Q7L592 441 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 ADGRG3Q86Y34 549 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 MARCH9Q86YJ5 346 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 MISPQ8IVT2 679 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 NANOGP1Q8N7R0 232 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 OR4K13Q8NH42 304 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 RNF138Q8WVD3 245 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 FN3KQ9H479 309 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 METTL7AQ9H8H3 244 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 C12orf10Q9HB07 376 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 VDAC3Q9Y277 283 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 FARSAQ9Y285 508 aaKnown RBP19.16■□□□□ 0.66
PTPRF-207ENST00000436724 EML6Q6ZMW3 1958 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 RIIAD1A6NNX1 92 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 PRR23D1E9PI22 279 aaPredicted RBP19.16■□□□□ 0.66
PTPRF-207ENST00000436724 GYPBP06028 91 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 PRR23D2P0DMB1 279 aaPredicted RBP19.16■□□□□ 0.66
PTPRF-207ENST00000436724 F8A1P23610 371 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 IL20RBQ6UXL0 311 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 PIP4P1Q86T03 277 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 GHDCQ8N2G8 530 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 DEFB124Q8NES8 71 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 SDR9C7Q8NEX9 313 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 OR52E2Q8NGJ4 325 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 M1APQ8TC57 530 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 OR51V1Q9H2C8 321 aa19.16■□□□□ 0.66
PTPRF-207ENST00000436724 FGF20Q9NP95 211 aaPredicted RBP19.16■□□□□ 0.66
PTPRF-207ENST00000436724 ASPMQ8IZT6 3477 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 TMED7-TICAM2A0A0A6YYA0 188 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 SUSD5O60279 629 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 ASAH2BP0C7U1 165 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 HK1P19367 917 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 RGS6P49758 472 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 PPP5CP53041 499 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 ERVK-25P63136 954 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 ZNF404Q494X3 552 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 SOWAHCQ53LP3 525 aaPredicted RBP19.15■□□□□ 0.66
PTPRF-207ENST00000436724 OR2G6Q5TZ20 316 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 GRINAQ7Z429 371 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 SIRT6Q8N6T7 355 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 KATNB1Q9BVA0 655 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 MND1Q9BWT6 205 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 OR11A1Q9GZK7 315 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 OR51E2Q9H255 320 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 MMP27Q9H306 513 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 RNF167Q9H6Y7 350 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 SEC14L4Q9UDX3 406 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 TMED7Q9Y3B3 224 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 CPAMD8Q8IZJ3 1885 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 TMEM72A0PK05 275 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 IMPA2O14732 288 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 POLR2HP52434 150 aaKnown RBP19.15■□□□□ 0.66
PTPRF-207ENST00000436724 SLC16A1P53985 500 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 SPHARQ15513 63 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 TSTQ16762 297 aaKnown RBP19.15■□□□□ 0.66
PTPRF-207ENST00000436724 ZNF791Q3KP31 576 aaPredicted RBP19.15■□□□□ 0.66
PTPRF-207ENST00000436724 STPG1Q5TH74 334 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 TMEM164Q5U3C3 297 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 PRAMEF20Q5VT98 475 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 ARHGAP11AQ6P4F7 1023 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 LHFPL3Q86UP9 236 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 OR51G2Q8NGK0 314 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 OPALINQ96PE5 141 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 CDCP1Q9H5V8 836 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 CHCHD3Q9NX63 227 aaKnown RBP19.15■□□□□ 0.66
PTPRF-207ENST00000436724 BAIAP2Q9UQB8 552 aa19.15■□□□□ 0.66
PTPRF-207ENST00000436724 PCSK5Q92824 1860 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 ANKUB1A6NFN9 424 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 SHISA8B8ZZ34 492 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 MYL12BO14950 172 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 SLC25A12O75746 678 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 SERPINI2O75830 405 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 IGF2P01344 180 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 F13BP05160 661 aa19.14■□□□□ 0.65
PTPRF-207ENST00000436724 ZNF3P17036 446 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms