RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 TCTE3Q8IZS6 198 aa17■□□□□ 0.31
CLK1-205ENST00000434813 THAP4Q8WY91 577 aa17■□□□□ 0.31
CLK1-205ENST00000434813 MRPL48Q96GC5 212 aaKnown RBP17■□□□□ 0.31
CLK1-205ENST00000434813 CHRNA10Q9GZZ6 450 aa17■□□□□ 0.31
CLK1-205ENST00000434813 SOHLH2Q9NX45 425 aa17■□□□□ 0.31
CLK1-205ENST00000434813 PNMTP11086 282 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 GFERP55789 205 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 SIRPAP78324 504 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 CDK10Q15131 360 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 CCDC58Q4VC31 144 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 HACD4Q5VWC8 232 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 WBP2NLQ6ICG8 309 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 PYHIN1Q6K0P9 492 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 NOXA1Q86UR1 476 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 LMX1AQ8TE12 382 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 SNX33Q8WV41 574 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ZNRF4Q8WWF5 429 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 CREB3L1Q96BA8 519 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 LMF1Q96S06 567 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 THAP7Q9BT49 309 aaPredicted RBP16.99■□□□□ 0.31
CLK1-205ENST00000434813 EXOSC3Q9NQT5 275 aaKnown RBP16.99■□□□□ 0.31
CLK1-205ENST00000434813 OR6C68A6NDL8 312 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 NOTOA8MTQ0 251 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 C17orf105B2RV13 164 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 MAGEB4O15481 346 aaPredicted RBP16.99■□□□□ 0.31
CLK1-205ENST00000434813 GATBO75879 557 aaKnown RBP16.99■□□□□ 0.31
CLK1-205ENST00000434813 PAHP00439 452 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 YES1P07947 543 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 UCHL1P09936 223 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 TFPIP10646 304 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 CD1CP29017 333 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 RPS11P62280 158 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLK1-205ENST00000434813 HSF2Q03933 536 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 GXYLT1Q4G148 440 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 TIGD3Q6B0B8 471 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 MED25Q71SY5 747 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 UTS2BQ765I0 119 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ATG4DQ86TL0 474 aaPredicted RBP16.99■□□□□ 0.31
CLK1-205ENST00000434813 C17orf82Q86X59 251 aaPredicted RBP16.99■□□□□ 0.31
CLK1-205ENST00000434813 SLITRK4Q8IW52 837 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ZNF527Q8NB42 609 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ZPLD1Q8TCW7 415 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 RASD2Q96D21 266 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 TGM7Q96PF1 710 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ZCCHC4Q9H5U6 513 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 PDE7BQ9NP56 450 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 UBQLN4Q9NRR5 601 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ACOXLQ9NUZ1 547 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 ABRACLQ9P1F3 81 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 NCDNQ9UBB6 729 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 COPS3Q9UNS2 423 aa16.99■□□□□ 0.31
CLK1-205ENST00000434813 IGHV5-51A0A0C4DH38 117 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 ELOA3DA6NLF2 546 aaPredicted RBP16.98■□□□□ 0.31
CLK1-205ENST00000434813 LANCL1O43813 399 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 FZD7O75084 574 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 UBL4AP11441 157 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 TCEA1P23193 301 aaKnown RBP16.98■□□□□ 0.31
CLK1-205ENST00000434813 CD27P26842 260 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 SLC6A1P30531 599 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 CD83Q01151 205 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 SKP2Q13309 424 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 GPR176Q14439 515 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 CD226Q15762 336 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 ELOA3BQ3SY89 546 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 GPR135Q8IZ08 494 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 SLC7A5P1Q8MH63 180 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 ELOA3Q8NG57 546 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 RPS4Y2Q8TD47 263 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 LIPHQ8WWY8 451 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 HSPA12BQ96MM6 686 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 GNG8Q9UK08 70 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 GMEB2Q9UKD1 530 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 HIF3AQ9Y2N7 669 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 HEATR5AQ86XA9 2040 aa16.98■□□□□ 0.31
CLK1-205ENST00000434813 A0A1W2PR77 199 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 FAM47E-STBD1D6RA91 191 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 FLRT2O43155 660 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 GPRIN2O60269 458 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 SELENOFO60613 162 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 IL33O95760 270 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 ERVK-25P63136 954 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 GRM7Q14831 915 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 DEFB119Q8N690 84 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 GATSQ8NAP1 163 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 BEX2Q9BXY8 128 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 SPRTNQ9H040 489 aaPredicted RBP16.97■□□□□ 0.31
CLK1-205ENST00000434813 LANCL2Q9NS86 450 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 EPHA6Q9UF33 1036 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 THADAQ6YHU6 1953 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 ANKRD61A6NGH8 418 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 AGRPO00253 132 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 IMPA2O14732 288 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 EPXP11678 715 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 APEHP13798 732 aaKnown RBP16.97■□□□□ 0.31
CLK1-205ENST00000434813 ARSBP15848 533 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 ATF1P18846 271 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 CD38P28907 300 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 GRK6P43250 576 aa16.97■□□□□ 0.31
CLK1-205ENST00000434813 AGFG1P52594 562 aaKnown RBP16.97■□□□□ 0.31
CLK1-205ENST00000434813 SLC37A1P57057 533 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms