RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 FAM111BQ6SJ93 734 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
DDX56-205ENST00000433257 CMTM4Q8IZR5 234 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 EIF4E3Q8N5X7 224 aaKnown RBP13.59□□□□□ -0.23
DDX56-205ENST00000433257 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
DDX56-205ENST00000433257 PFN4Q8NHR9 129 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 PELI1Q96FA3 418 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 NOX3Q9HBY0 568 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 C12orf4Q9NQ89 552 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 MOSPD1Q9UJG1 213 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 RCE1Q9Y256 329 aa13.59□□□□□ -0.23
DDX56-205ENST00000433257 MUC3AQ02505 3323 aa13.58□□□□□ -0.23
DDX56-205ENST00000433257 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
DDX56-205ENST00000433257 A0A0B4J2E0 115 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 A0A1B0GX12 115 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 MFSD2BA6NFX1 497 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 C4orf51C9J302 202 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 AQP8O94778 261 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 NDUFB6O95139 128 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 EGFP01133 1207 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 MRPL3P09001 348 aaKnown RBP13.58□□□□□ -0.24
DDX56-205ENST00000433257 CPMP14384 443 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 NAGAP17050 411 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 IL32P24001 234 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 HTR2AP28223 471 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 VSX2P58304 361 aaPredicted RBP13.58□□□□□ -0.24
DDX56-205ENST00000433257 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
DDX56-205ENST00000433257 SIGLEC14Q08ET2 396 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 ITPRIPL2Q3MIP1 535 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 ZNF550Q7Z398 422 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 PAQR7Q86WK9 346 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 OR13C2Q8NGS9 318 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 HAVCR1Q96D42 359 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 MNTQ99583 582 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 ARPC5LQ9BPX5 153 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 ZNF426Q9BUY5 554 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 HCAR1Q9BXC0 346 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 SDHAF2Q9NX18 166 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 CA5BQ9Y2D0 317 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 ZNF281Q9Y2X9 895 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 PCYT1BQ9Y5K3 369 aaPredicted RBP13.58□□□□□ -0.24
DDX56-205ENST00000433257 V9GY05 133 aa13.58□□□□□ -0.24
DDX56-205ENST00000433257 PRR19A6NJB7 356 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 MID1O15344 667 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 PPP1R3DO95685 299 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 HPXP02790 462 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 HOXD4P09016 255 aaPredicted RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 CSF1P09603 554 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 ANKRD34CP0C6C1 535 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 ACSM4P0C7M7 580 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 ZNF250P15622 560 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 SSTR2P30874 369 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 S100A11P31949 105 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 DIO1P49895 249 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 GPR143P51810 404 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 ART1P52961 327 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 METAP1P53582 386 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 PSMD4P55036 377 aaKnown RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 CRYZQ08257 329 aaKnown RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 IRF4Q15306 451 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 LTB4RQ15722 352 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 NDUFAF6Q330K2 333 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 ZC3H14Q6PJT7 736 aaKnown RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 ABHD13Q7L211 337 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 SHDQ96IW2 340 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 SFXN2Q96NB2 322 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 PELOQ9BRX2 385 aaKnown RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 MKKSQ9NPJ1 570 aaPredicted RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 ING1Q9UK53 422 aaPredicted RBP13.57□□□□□ -0.24
DDX56-205ENST00000433257 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
DDX56-205ENST00000433257 ZC3H12DA2A288 527 aaKnown RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 OR2M5A3KFT3 312 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ARPC1BO15143 372 aaKnown RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 BRINP1O60477 761 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ADH1BP00325 375 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 GLULP15104 373 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 CD96P40200 585 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SOX9P48436 509 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 VEGFCP49767 419 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SELENOPP49908 381 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 RBMS2Q15434 407 aaKnown RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 FHL5Q5TD97 284 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 FAM199XQ6PEV8 388 aaPredicted RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 WDR88Q6ZMY6 472 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 DPY19L2P2Q6ZN68 376 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 FAM220AQ7Z4H9 259 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 CAMKVQ8NCB2 501 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 DNAAF1Q8NEP3 725 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 MOSPD2Q8NHP6 518 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 RSC1A1Q92681 617 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 MIB2Q96AX9 1013 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ELMOD3Q96FG2 381 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 XKR8Q9H6D3 395 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 TM7SF3Q9NS93 570 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 C20orf141Q9NUB4 165 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms