RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SEMG1P04279 462 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 NPR2P20594 1047 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 COX5AP20674 150 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 GDF1P27539 372 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 QARSP47897 775 aaKnown RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 HLCSP50747 726 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 NCBP1Q09161 790 aaKnown RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 CUL1Q13616 776 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 SERTAD2Q14140 314 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 GRB7Q14451 532 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 ISXQ2M1V0 245 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 GPRC6AQ5T6X5 926 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 TPGS2Q68CL5 300 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 KCNIP4Q6PIL6 250 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 USP50Q70EL3 339 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 DHDDSQ86SQ9 333 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 HPS6Q86YV9 775 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 UBQLNLQ8IYU4 475 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 MCOLN2Q8IZK6 566 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF525Q8N782 197 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 MRPS31Q92665 395 aaKnown RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 EFHD2Q96C19 240 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 FAM122AQ96E09 287 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 CNDP1Q96KN2 507 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC38A2Q96QD8 506 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR5M11Q96RB7 305 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 IL4I1Q96RQ9 567 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 KLHDC3Q9BQ90 382 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 PYGO2Q9BRQ0 406 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 DEFB126Q9BYW3 111 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 YY1AP1Q9H869 796 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 VNN3Q9NY84 501 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 TMEM9Q9P0T7 183 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 LCMT1Q9UIC8 334 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 MOKQ9UQ07 419 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 PIGLQ9Y2B2 252 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 PALLDQ8WX93 1383 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 PEAK1Q9H792 1746 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 PDE4DIPQ5VU43 2346 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 VSTM2BA6NLU5 285 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 DHRS7CA6NNS2 312 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 TRDCB7Z8K6 153 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 FCN1O00602 326 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 TIMM8AO60220 97 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF254O75437 659 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 SERF1AO75920 110 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 LRATO95237 230 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 LALBAP00709 142 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 LGALS2P05162 132 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF853P0CG23 659 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 NCK1P16333 377 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 POLR2EP19388 210 aaKnown RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 FGF9P31371 208 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 OPRD1P41143 372 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 LEPP41159 167 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 MAGEA8P43361 318 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 DAP3P51398 398 aaKnown RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 SEC61GP60059 68 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 KRTAP10-12P60413 245 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 FGL1Q08830 312 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 VGLL4Q14135 290 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 DPYSL2Q16555 572 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 AANATQ16613 207 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 LRRC36Q1X8D7 754 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 FILIP1LQ4L180 1135 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 BOLA3Q53S33 107 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 KLF17Q5JT82 389 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 PHYHD1Q5SRE7 291 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 PDZK1Q5T2W1 519 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 CST9Q5W186 159 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF774Q6NX45 483 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 VITQ6UXI7 678 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 TRPM8Q7Z2W7 1104 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 CDR2LQ86X02 465 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR56B4Q8NH76 319 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF184Q99676 751 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 TCHPQ9BT92 498 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 POPDC2Q9HBU9 364 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 SGK2Q9HBY8 427 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 TM9SF3Q9HD45 589 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 RSPH14Q9UHP6 348 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 PHF11Q9UIL8 331 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 PPIAL4AQ9Y536 164 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 FLVCR1Q9Y5Y0 555 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 PCDH11XQ9BZA7 1347 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 KDM6AO15550 1401 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 SMG6Q86US8 1419 aaKnown RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 COL2A1P02458 1487 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 TOPAZ1Q8N9V7 1692 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 ABCA3Q99758 1704 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 FMN2Q9NZ56 1722 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 MYO5BQ9ULV0 1848 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 A0A0C4DFX4 3053 aa2.3□□□□□ -2.04
HMGB1P27-201ENST00000431429 E9PCH4 1651 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 TRPM1Q7Z4N2 1603 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CICQ96RK0 1608 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 CPSF1Q10570 1443 aaKnown RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 NSD2O96028 1365 aa2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 RPAP1Q9BWH6 1393 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P27-201ENST00000431429 MAP3K19Q56UN5 1328 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms