RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
USP40-205ENST00000430158 SLC7A7Q9UM01 511 aa11.09□□□□□ -0.63
USP40-205ENST00000430158 CYTIPO60759 359 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 GMNNO75496 209 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 AGFG2O95081 481 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 IL18BPO95998 194 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 BGLAPP02818 100 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 SGCBQ16585 318 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 C5orf46Q6UWT4 87 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 CCDC121Q6ZUS5 278 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 FCRLAQ7L513 359 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 CHMP1BQ7LBR1 199 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 MRGPRGQ86SM5 289 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 ADGRG5Q8IZF4 528 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
USP40-205ENST00000430158 LILRB4Q8NHJ6 448 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 SSC4DQ8WTU2 575 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 DNAJA3Q96EY1 480 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 ZFP3Q96NJ6 502 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 MMADHCQ9H3L0 296 aaPredicted RBP11.08□□□□□ -0.64
USP40-205ENST00000430158 IL1RAPQ9NPH3 570 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 TIGARQ9NQ88 270 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 JKAMPQ9P055 326 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 V9GYQ6 96 aa11.08□□□□□ -0.64
USP40-205ENST00000430158 TRAV36DV7A0A075B6V5 113 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 IGKV3D-15A0A087WSY6 115 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 IGHV3-15A0A0B4J1V0 119 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 A0A1W2PNV4 684 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 TCRBV3S1A0A5B6 114 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 ZNF716A6NP11 495 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 HSPB2A8KAH6 182 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 SS18L1O75177 396 aaPredicted RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 CGAP01215 116 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 IGF2P01344 180 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 IL2RAP01589 272 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 CRHP06850 196 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 TMIGD3P0DMS9 266 aaPredicted RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 FCGR2AP12318 317 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 RHCEP18577 417 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 FPR1P21462 350 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 CTSSP25774 331 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 NTF4P34130 210 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 IDUAP35475 653 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 RBM34P42696 430 aaKnown RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 SLC16A1P53985 500 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 UGT2B15P54855 530 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 PER3P56645 1201 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 TAS2R41P59536 307 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 CSNK2A1P68400 391 aaPredicted RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 SLC35A1P78382 337 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 PDK3Q15120 406 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 HSPB2Q16082 182 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 XKRXQ6PP77 449 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 PAQR6Q6TCH4 344 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 YTHDF3Q7Z739 585 aaKnown RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 CCDC103Q8IW40 242 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 AQP12AQ8IXF9 295 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 TMEM99Q8N816 258 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 RELL2Q8NC24 303 aaPredicted RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 ABHD3Q8WU67 409 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 TMEM255BQ8WV15 326 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 INTS12Q96CB8 462 aaKnown RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 STARD4Q96DR4 205 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 MOGAT1Q96PD6 335 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 PSD2Q9BQI7 771 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 SLC19A3Q9BZV2 496 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 MAGIXQ9H6Y5 334 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 NMNAT1Q9HAN9 279 aaPredicted RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 BCO1Q9HAY6 547 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 RHCGQ9UBD6 479 aa11.07□□□□□ -0.64
USP40-205ENST00000430158 ZNF629Q9UEG4 869 aaPredicted RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 MCTS1Q9ULC4 181 aaKnown RBP11.07□□□□□ -0.64
USP40-205ENST00000430158 A0A1W2PRQ8 180 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 AQP7P3A6NL99 342 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 LRRN3E7EW58 273 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 hCG_2039718K7EN88 272 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 DIRAS1O95057 198 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 AHSA1O95433 338 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SYNGR4O95473 234 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 GPIP06744 558 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 PTNP21246 168 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 CHRNB4P30926 498 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 RPS5P46782 204 aaKnown RBP11.06□□□□□ -0.64
USP40-205ENST00000430158 LIMS1P48059 325 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SMSP52788 366 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 OR2B6P58173 313 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
USP40-205ENST00000430158 TFF3Q07654 80 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 ST3GAL3Q11203 375 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 DGCR6Q14129 220 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 OR7A5Q15622 319 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 ZNF74Q16587 644 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 FAM69AQ5T7M9 428 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 OR2A2Q6IF42 318 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SLC46A3Q7Z3Q1 461 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 BTLAQ7Z6A9 289 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 GCNT2Q8N0V5 402 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 SLC43A2Q8N370 569 aa11.06□□□□□ -0.64
USP40-205ENST00000430158 ZIC4Q8N9L1 334 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms