RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 B4DXG7 233 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 H3BMH7 237 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 IMPA2O14732 288 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 TFECO14948 347 aaPredicted RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 PLA2G10O15496 165 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 GATBO75879 557 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 ELK1P19419 428 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 IL12BP29460 328 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 OR1D4P47884 311 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 GDI2P50395 445 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 ERVK-25P63136 954 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 SIRPAP78324 504 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 P2RY14Q15391 338 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 SF3A2Q15428 464 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 TP53I3Q53FA7 332 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 YOD1Q5VVQ6 348 aaPredicted RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 HLA-DQA1Q5Y7H0 255 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NR2C2APQ86WQ0 139 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 KMT5CQ86Y97 462 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 ZNF563Q8TA94 476 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 DAZLQ92904 295 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 PELI1Q96FA3 418 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 LMF1Q96S06 567 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NMNAT3Q96T66 252 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 LAT2Q9GZY6 243 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 MMP28Q9H239 520 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 MARCH7Q9H992 704 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NANSQ9NR45 359 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 CYSLTR2Q9NS75 346 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 RBFOX1Q9NWB1 397 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 UCKL1Q9NWZ5 548 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NPFFR2Q9Y5X5 522 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 MUC3AQ02505 3323 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 COL5A1P20908 1838 aaPredicted RBP12.5□□□□□ -0.41
THBS3-202ENST00000428962 A0A1W2PRG6 482 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 HMX3A6NHT5 357 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 A8MUA0 341 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 LRRN3E7EW58 273 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 DVL2O14641 736 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 HYAL3O43820 417 aaPredicted RBP12.5□□□□□ -0.41
THBS3-202ENST00000428962 GLCEO94923 617 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 DDAH2O95865 285 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 CD14P08571 375 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 RAB3BP20337 219 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 DDOSTP39656 456 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 SLC25A1P53007 311 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 OR1D5P58170 312 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 GPLD1P80108 840 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 EMC4Q5J8M3 183 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 RPTNQ6XPR3 784 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 SCAIQ8N9R8 606 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 OR6K6Q8NGW6 343 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 OR6F1Q8NGZ6 308 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 HAVCR2Q8TDQ0 301 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 ZNF721Q8TF20 911 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 THAP4Q8WY91 577 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 PHYHIPQ92561 330 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 TSLPQ969D9 159 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 GAL3ST4Q96RP7 486 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.5□□□□□ -0.41
THBS3-202ENST00000428962 LRRN3Q9H3W5 708 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 ZNF304Q9HCX3 659 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 NCDNQ9UBB6 729 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 TEKT2Q9UIF3 430 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 GNG8Q9UK08 70 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 MOKQ9UQ07 419 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
THBS3-202ENST00000428962 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 TEX13CA0A0J9YWL9 993 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 TCRBV16S1A1N1A0A5B0 115 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 LYRM1O43325 122 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 GPRIN2O60269 458 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 NPR2P20594 1047 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 SDHAP31040 664 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 THBS2P35442 1172 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 CSNK1EP49674 416 aaKnown RBP12.49□□□□□ -0.41
THBS3-202ENST00000428962 STARD6P59095 220 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 ALG10Q5BKT4 473 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 LEG1Q6P5S2 330 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 PRSS42Q7Z5A4 293 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 SPEM1Q8N4L4 309 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 SAMD12Q8N8I0 201 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 C1orf216Q8TAB5 229 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 SMAP2Q8WU79 429 aaPredicted RBP12.49□□□□□ -0.41
THBS3-202ENST00000428962 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 RASD2Q96D21 266 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 DDOQ99489 341 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms