RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CBFBQ13951 182 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 CTU2Q2VPK5 515 aaKnown RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 PLEKHN1Q494U1 663 aaPredicted RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ARMC10Q8N2F6 343 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF555Q8NEP9 628 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR14L1PQ8NHC6 308 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 MOSPD2Q8NHP6 518 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 SMAP2Q8WU79 429 aaPredicted RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 RAB2BQ8WUD1 216 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 RNF138Q8WVD3 245 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TTC9Q92623 222 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 BPIFA2Q96DR5 249 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 FOXN4Q96NZ1 517 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 HOXD1Q9GZZ0 328 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TESQ9UGI8 421 aaKnown RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMED7Q9Y3B3 224 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 CSMD1Q96PZ7 3565 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 USP9XQ93008 2570 aaPredicted RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC16A6O15403 523 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 NOL3O60936 208 aaKnown RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 APOL3O95236 402 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 EEF1B2P24534 225 aaKnown RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 MAGEA8P43361 318 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 CLK3P49761 638 aaKnown RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF41P51814 821 aaPredicted RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 SUCLG1P53597 346 aaKnown RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 CLDN15P56746 228 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ISL1P61371 349 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 PIGFQ07326 219 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 CD47Q08722 323 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 MFAP5Q13361 173 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 IL18R1Q13478 541 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 FHL1Q13642 323 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TRAM2Q15035 370 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 MOGQ16653 247 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMEM176BQ3YBM2 270 aaPredicted RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF691Q5VV52 312 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 KDM4DQ6B0I6 523 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 WBP2NLQ6ICG8 309 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ULK3Q6PHR2 472 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 RRM2BQ7LG56 351 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMEM251Q8N6I4 163 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 LSMEM1Q8N8F7 131 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TOR1AIP2Q8NFQ8 470 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 CNIH3Q8TBE1 160 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF566Q969W8 418 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 NRBF2Q96F24 287 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF845Q96IR2 970 aaPredicted RBP8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 DHRS1Q96LJ7 313 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 IL4I1Q96RQ9 567 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF347Q96SE7 839 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 EPYCQ99645 322 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZNF559Q9BR84 538 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 GABARAPL1Q9H0R8 117 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 ZMIZ1Q9ULJ6 1067 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 TMCC3Q9ULS5 477 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 SSUH2Q9Y2M2 353 aa8.59□□□□□ -1.03
HMGCLL1-206ENST00000428842 MED12LQ86YW9 2145 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 LOC100130705A0A1B0GUX0 176 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 A0A1W2PQD3 144 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 FAM183AA6NL82 134 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 H7C1C5 153 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 MAGEB3O15480 346 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 CHP2O43745 196 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 AKR7A3O95154 331 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 GP1BBP13224 206 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 HK1P19367 917 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ENDOUP21128 410 aaKnown RBP8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 CXCR1P25024 350 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ADH7P40394 386 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 LCN6P62502 163 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 PLGLB1Q02325 96 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 TMED1Q13445 227 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 RFX4Q33E94 735 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 LINC00303Q3SY05 128 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ANKDD1AQ495B1 522 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ACSM5Q6NUN0 579 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF550Q7Z398 422 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 HIPK1Q86Z02 1210 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 EGFL6Q8IUX8 553 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 RBMXL3Q8N7X1 1067 aaKnown RBP8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ACOT11Q8WXI4 607 aaPredicted RBP8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 MUL1Q969V5 352 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 SAMD8Q96LT4 415 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR5B2Q96R09 309 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 UCN2Q96RP3 112 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 MED20Q9H944 212 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ALKBH4Q9NXW9 302 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 DKKL1Q9UK85 242 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 BLOC1S6Q9UL45 172 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 A0A087WUJ7 227 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 TNFSF11O14788 317 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR5F1O95221 314 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 NAGAP17050 411 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 PGCP20142 388 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 PCMT1P22061 227 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 CHMP24386 653 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms