RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 WBP2NLQ6ICG8 309 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 KLHL24Q6TFL4 600 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 DNM1P46Q6ZS02 220 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 AAED1Q7RTV5 226 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 DEPDC4Q8N2C3 294 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 MUC15Q8N387 334 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 WDR31Q8NA23 367 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 C1orf162Q8NEQ5 155 aaPredicted RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 SLC38A5Q8WUX1 472 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 VPS33AQ96AX1 596 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 TMEM19Q96HH6 336 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 ITCHQ96J02 903 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 ZNF385AQ96PM9 386 aaKnown RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 AMBRA1Q9C0C7 1298 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 RMND5AQ9H871 391 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 CACYBPQ9HB71 228 aaKnown RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 SLC17A5Q9NRA2 495 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 ZIM2Q9NZV7 527 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 AMDHD2Q9Y303 409 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 ATP23Q9Y6H3 246 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 IGHV4-30-2A0A087WSY4 118 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 AQP7P3A6NL99 342 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 FRS3O43559 492 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 CRLF1O75462 422 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 ZCCHC18P0CG32 403 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 MPGP29372 298 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 FABP6P51161 128 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 POLR2JP52435 117 aaKnown RBP14.97□□□□□ -0.01
TRIM39-209ENST00000428728 COPZ1P61923 177 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 TGFBR3Q03167 851 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 LARS2Q15031 903 aaKnown RBP14.97□□□□□ -0.01
TRIM39-209ENST00000428728 CLIP4Q8N3C7 705 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 C17orf78Q8N4C9 275 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 TMEM45BQ96B21 275 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 TAPBPLQ9BX59 468 aa14.97□□□□□ -0.01
TRIM39-209ENST00000428728 SDR39U1Q9NRG7 319 aaPredicted RBP14.97□□□□□ -0.01
TRIM39-209ENST00000428728 TMEM247A6NEH6 219 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 UBDO15205 165 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 KRT33AO76009 404 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 TFPTP0C1Z6 253 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 LGALS3BPQ08380 585 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 PRAMEF8Q5VWM4 474 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 PRAMEF7Q5VXH5 474 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 CLEC2AQ6UVW9 174 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 MSANTD1Q6ZTZ1 278 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 SERPINA11Q86U17 422 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 MIER2Q8N344 545 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 ZIC4Q8N9L1 334 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 ALKBH3Q96Q83 286 aaPredicted RBP14.96□□□□□ -0.01
TRIM39-209ENST00000428728 RHNO1Q9BSD3 238 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 FKRPQ9H9S5 495 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 YAE1D1Q9NRH1 226 aa14.96□□□□□ -0.01
TRIM39-209ENST00000428728 FAM234BA2RU67 622 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 A8MVM7 634 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 ATP6V1G2-DDX39BF2Z307 99 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 CD5LO43866 347 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 NUDT7P0C024 238 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 HIKESHIQ53FT3 197 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 C1orf140Q5VVS0 124 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 TMEM225Q6GV28 225 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 SLC2A7Q6PXP3 512 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 ZNF525Q8N782 197 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 POMGNT2Q8NAT1 580 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 MAL2Q969L2 176 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 C3orf49Q96BT1 292 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 TLCD1Q96CP7 247 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 SF3B5Q9BWJ5 86 aaKnown RBP14.95□□□□□ -0.02
TRIM39-209ENST00000428728 SPATA9Q9BWV2 254 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 ZNF232Q9UNY5 417 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 CHST2Q9Y4C5 530 aa14.95□□□□□ -0.02
TRIM39-209ENST00000428728 A0A0G2JPF8 293 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 TMEM229AB2RXF0 380 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 HNRNPCL2B2RXH8 293 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 HNRNPCL3B7ZW38 293 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 KLF11O14901 512 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 HNRNPCL1O60812 293 aaKnown RBP14.94□□□□□ -0.02
TRIM39-209ENST00000428728 AHSA1O95433 338 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 HNRNPCL4P0DMR1 293 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 SELENOPP49908 381 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 SLC18A1P54219 525 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 PRPS1P60891 318 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 HOXC5Q00444 222 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 RAB35Q15286 201 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 ZNF311Q5JNZ3 666 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 ZNF544Q6NX49 715 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 ABHD12BQ7Z5M8 362 aaPredicted RBP14.94□□□□□ -0.02
TRIM39-209ENST00000428728 PAIP1Q9H074 479 aaKnown RBP14.94□□□□□ -0.02
TRIM39-209ENST00000428728 ARMC7Q9H6L4 198 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 TMBIM4Q9HC24 238 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 THUMPD1Q9NXG2 353 aaKnown RBP14.94□□□□□ -0.02
TRIM39-209ENST00000428728 MOKQ9UQ07 419 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 PCDHB14Q9Y5E9 798 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 USH1CQ9Y6N9 552 aa14.94□□□□□ -0.02
TRIM39-209ENST00000428728 ZNF587BE7ETH6 402 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 CLIC1O00299 241 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 TLX2O43763 284 aaPredicted RBP14.93□□□□□ -0.02
TRIM39-209ENST00000428728 GPRIN2O60269 458 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 LGI1O95970 557 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 WNT11O96014 354 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 P2RY4P51582 365 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms