RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 A0A0J9YW62 118 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 A0A1B0GTH9 108 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 LIPT2A6NK58 231 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 H0YC42 278 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 H3BN98 237 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 M0R082 166 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SULT2B1O00204 365 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 AQP7O14520 342 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 CDC42EP2O14613 210 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 KLF4O43474 513 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR6A2O95222 327 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SOX14O95416 240 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 HPRP00739 348 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 BGLAPP02818 100 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ALPLP05186 524 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 IMPDH2P12268 514 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 POU1F1P28069 291 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 GRPRP30550 384 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 VHLP40337 213 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 GSSP48637 474 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 DIO1P49895 249 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 RAD23AP54725 363 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TPD52P55327 224 aaPredicted RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 CLDN18P56856 261 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 RPS3AP61247 264 aaKnown RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 CSNK2A1P68400 391 aaPredicted RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SLC35A1P78382 337 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TSPAN31Q12999 210 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 PMS2P3Q13401 168 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 MFSD13AQ14CX5 517 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TAF11Q15544 211 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SGCBQ16585 318 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 NHSL2Q5HYW2 709 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 VASNQ6EMK4 673 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 C1orf94Q6P1W5 598 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 PCSK4Q6UW60 755 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 IZUMO2Q6UXV1 221 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ESPNLQ6ZVH7 1005 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TMPRSS11FQ6ZWK6 438 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 CHMP1BQ7LBR1 199 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 PRICKLE2Q7Z3G6 844 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 OAFQ86UD1 273 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 GHDCQ8N2G8 530 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 LRRC17Q8N6Y2 441 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR52L1Q8NGH7 329 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR6S1Q8NH40 331 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR51A7Q8NH64 312 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR10D3Q8NH80 312 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 MFSD8Q8NHS3 518 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 DNAJC9Q8WXX5 260 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 MIB2Q96AX9 1013 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SARAFQ96BY9 339 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SNRNP40Q96DI7 357 aaKnown RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 WBP1Q96G27 269 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF587Q96SQ5 575 aaPredicted RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 GPA33Q99795 319 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SLC29A1Q99808 456 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TACO1Q9BSH4 297 aaKnown RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 DGCR6LQ9BY27 220 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 NDEL1Q9GZM8 345 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TIGARQ9NQ88 270 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 TBC1D23Q9NUY8 699 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ASF1BQ9NVP2 202 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SMPD3Q9NY59 655 aaPredicted RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 USE1Q9NZ43 259 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ENOPH1Q9UHY7 261 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF229Q9UJW7 825 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 CORINQ9Y5Q5 1042 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 CDH10Q9Y6N8 788 aa7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 SMG1Q96Q15 3661 aaKnown RBP7.11□□□□□ -1.27
HMGA1P4-201ENST00000428643 IGHV3-15A0A0B4J1V0 119 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 A0A1B0GVC2 190 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR14I1A6ND48 311 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 FTCDNL1E5RQL4 147 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 NPIPA2E9PIF3 369 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 NPIPA3F8WFD2 350 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNHIT1O43257 154 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 DNPH1O43598 174 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 CXCL13O43927 109 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 SERPINI2O75830 405 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 AKR7A3O95154 331 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 SYNGR4O95473 234 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 PMS2P2O95744 297 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 IGF2P01344 180 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 ABOP16442 354 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 RPL4P36578 427 aaKnown RBP7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 SLC9A3P48764 834 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 DAPP51397 102 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 SUCLG1P53597 346 aaKnown RBP7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 AQP4P55087 323 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 CLDN15P56746 228 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 CARD18P57730 90 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 LTBQ06643 244 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 COX10Q12887 443 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 BCL2A1Q16548 175 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 CTU2Q2VPK5 515 aaKnown RBP7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 RFX4Q33E94 735 aa7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZIK1Q3SY52 487 aaPredicted RBP7.1□□□□□ -1.27
HMGA1P4-201ENST00000428643 SLC36A3Q495N2 470 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms