RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
PDAP1-202ENST00000426447 SF3B5Q9BWJ5 86 aaKnown RBP12.7□□□□□ -0.38
PDAP1-202ENST00000426447 SERHL2Q9H4I8 314 aa12.7□□□□□ -0.38
PDAP1-202ENST00000426447 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
PDAP1-202ENST00000426447 LPAR2Q9HBW0 351 aa12.7□□□□□ -0.38
PDAP1-202ENST00000426447 MOV10Q9HCE1 1003 aaKnown RBP12.7□□□□□ -0.38
PDAP1-202ENST00000426447 HIF1ANQ9NWT6 349 aa12.7□□□□□ -0.38
PDAP1-202ENST00000426447 OSGIN1Q9UJX0 560 aa12.7□□□□□ -0.38
PDAP1-202ENST00000426447 RNF103-CHMP3A0A140T963 221 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 OR6C65A6NJZ3 312 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 TMEM233B4DJY2 109 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 COPEO14579 308 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 GPIP06744 558 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 FGF4P08620 206 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 TACR3P29371 465 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 CRHR1P34998 444 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 HGFACQ04756 655 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 CEACAM7Q14002 265 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 OR7A5Q15622 319 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 C3orf36Q3SXR2 165 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 GPAT3Q53EU6 434 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 TYW3Q6IPR3 259 aaKnown RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 FAHD2BQ6P2I3 314 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 FNDC5Q8NAU1 212 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 AGR3Q8TD06 166 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 BCL2L2Q92843 193 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 RAB8BQ92930 207 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 ZG16BQ96DA0 208 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 FAHD2AQ96GK7 314 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 JMJD8Q96S16 334 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 RBM4Q9BWF3 364 aaKnown RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 GATA5Q9BWX5 397 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 TPK1Q9H3S4 243 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 EXOSC3Q9NQT5 275 aaKnown RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 POLE3Q9NRF9 147 aa12.69□□□□□ -0.38
PDAP1-202ENST00000426447 CRNNQ9UBG3 495 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-202ENST00000426447 DYSFO75923 2080 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
PDAP1-202ENST00000426447 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 AP3D1O14617 1153 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 TRIM13O60858 407 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 KHKP50053 298 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 MAP2K6P52564 334 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 HPCAP84074 193 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 C6orf136Q5SQH8 315 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 CLECL1Q8IZS7 167 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 C17orf53Q8N3J3 647 aaPredicted RBP12.68□□□□□ -0.38
PDAP1-202ENST00000426447 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
PDAP1-202ENST00000426447 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
PDAP1-202ENST00000426447 ROPN1LQ96C74 230 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 ZNF317Q96PQ6 595 aaPredicted RBP12.68□□□□□ -0.38
PDAP1-202ENST00000426447 TAPBPLQ9BX59 468 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 PIF1Q9H611 641 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 SEC61A2Q9H9S3 476 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 MID2Q9UJV3 735 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 SPEF1Q9Y4P9 236 aa12.68□□□□□ -0.38
PDAP1-202ENST00000426447 TMEM129A0AVI4 362 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 IGLV1-44P01699 117 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 CHRNGP07510 517 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 MSMBP08118 114 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 GUSBP08236 651 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
PDAP1-202ENST00000426447 UQCRBP14927 111 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 CBR1P16152 277 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 CXCR1P25024 350 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 GPR6P46095 362 aaPredicted RBP12.67□□□□□ -0.38
PDAP1-202ENST00000426447 SELENOPP49908 381 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 WHAMMP3Q1A5X7 153 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 TNFAIP8L2Q6P589 184 aaPredicted RBP12.67□□□□□ -0.38
PDAP1-202ENST00000426447 LSRQ86X29 649 aaPredicted RBP12.67□□□□□ -0.38
PDAP1-202ENST00000426447 CDK20Q8IZL9 346 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 FAM169BQ8N8A8 192 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 OR4A15Q8NGL6 344 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 MAGEE2Q8TD90 523 aaPredicted RBP12.67□□□□□ -0.38
PDAP1-202ENST00000426447 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
PDAP1-202ENST00000426447 LRRC37BQ96QE4 947 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 ADPRHL2Q9NX46 363 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 USP22Q9UPT9 525 aa12.67□□□□□ -0.38
PDAP1-202ENST00000426447 LIPT2A6NK58 231 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 AQP7P3A6NL99 342 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 CELA3BP08861 270 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 LIMS1P48059 325 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 HILS1P60008 231 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 NPRL3Q12980 569 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 DAG1Q14118 895 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 OR4F3Q6IEY1 312 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 ZCCHC23Q6ZST2 131 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 USP43Q70EL4 1123 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 CREB3L2Q70SY1 520 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 RIMKLAQ8IXN7 391 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 TEX29Q8N6K0 151 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 OR51F2Q8NH61 342 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 CLDND2Q8NHS1 167 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms