RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CCDC103Q8IW40 242 aa21.84■■□□□ 1.09
VEGFA-209ENST00000425836 SLC25A36Q96CQ1 311 aa21.84■■□□□ 1.09
VEGFA-209ENST00000425836 GMPPAQ96IJ6 420 aaPredicted RBP21.84■■□□□ 1.09
VEGFA-209ENST00000425836 SFXN3Q9BWM7 321 aa21.84■■□□□ 1.09
VEGFA-209ENST00000425836 NMNAT1Q9HAN9 279 aaPredicted RBP21.84■■□□□ 1.09
VEGFA-209ENST00000425836 IL1RAPQ9NPH3 570 aa21.84■■□□□ 1.09
VEGFA-209ENST00000425836 RAMP1O60894 148 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 FZD7O75084 574 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 TNFSF13O75888 250 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 DIRAS1O95057 198 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 AKR7A3O95154 331 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 ITGA2P17301 1181 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 BMP5P22003 454 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 OPRM1P35372 400 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 RBM34P42696 430 aaKnown RBP21.83■■□□□ 1.09
VEGFA-209ENST00000425836 KIR2DL2P43627 348 aaPredicted RBP21.83■■□□□ 1.09
VEGFA-209ENST00000425836 MCEMP1Q8IX19 187 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 PIK3C3Q8NEB9 887 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 OR6S1Q8NH40 331 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 CA5BP1Q8WTZ4 195 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 POP5Q969H6 163 aaKnown RBP21.83■■□□□ 1.09
VEGFA-209ENST00000425836 NAA11Q9BSU3 229 aaPredicted RBP21.83■■□□□ 1.09
VEGFA-209ENST00000425836 SLC19A3Q9BZV2 496 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 GLRX2Q9NS18 164 aa21.83■■□□□ 1.09
VEGFA-209ENST00000425836 ING1Q9UK53 422 aaPredicted RBP21.83■■□□□ 1.09
VEGFA-209ENST00000425836 PHF3Q92576 2039 aaKnown RBP21.83■■□□□ 1.09
VEGFA-209ENST00000425836 AQP12BA6NM10 295 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 SS18L1O75177 396 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 PLGP00747 810 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 BGLAPP02818 100 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 FABP3P05413 133 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 RASGEF1BQ0VAM2 473 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 TRAM2Q15035 370 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 ABLIM2Q6H8Q1 611 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 AQP12AQ8IXF9 295 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 TMEM99Q8N816 258 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 TMEM239Q8WW34 195 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 HS6ST2Q96MM7 605 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 PSD2Q9BQI7 771 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 UCK2Q9BZX2 261 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 MEPEQ9NQ76 525 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 GCN1Q92616 2671 aaKnown RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 KPNA4O00629 521 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 DVL2O14641 736 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 CLDN14O95500 239 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 CBLP22681 906 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 UGT2B15P54855 530 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 OTUD3Q5T2D3 398 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 EEF1A1P5Q5VTE0 462 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 FAM214BQ7L5A3 538 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 PIWIL3Q7Z3Z3 882 aaKnown RBP21.82■■□□□ 1.08
VEGFA-209ENST00000425836 ZDHHC21Q8IVQ6 265 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 CNEP1R1Q8N9A8 125 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 PIP5K1AQ99755 562 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 MAGIXQ9H6Y5 334 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 GP6Q9HCN6 339 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 KLHL9Q9P2J3 617 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 KLHL13Q9P2N7 655 aa21.82■■□□□ 1.08
VEGFA-209ENST00000425836 LRRN3E7EW58 273 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 P2RY4P51582 365 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 SIRPAP78324 504 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 VWA1Q6PCB0 445 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 TUSC5Q8IXB3 177 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 RELL2Q8NC24 303 aaPredicted RBP21.81■■□□□ 1.08
VEGFA-209ENST00000425836 PFN4Q8NHR9 129 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 PIGXQ8TBF5 258 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 STARD4Q96DR4 205 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 MOGAT1Q96PD6 335 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 BCO1Q9HAY6 547 aa21.81■■□□□ 1.08
VEGFA-209ENST00000425836 NCOA6Q14686 2063 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-209ENST00000425836 USP9XQ93008 2570 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-209ENST00000425836 AQP7P3A6NL99 342 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 FAM90A27PA6NNH2 459 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF716A6NP11 495 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 MT-ND1P03886 318 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 H1F0P07305 194 aaKnown RBP21.8■■□□□ 1.08
VEGFA-209ENST00000425836 GRPRP30550 384 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 MAGEA2P43356 314 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 LSM11P83369 360 aaKnown RBP eCLIP21.8■■□□□ 1.082e-28■□□□□ 11.1
VEGFA-209ENST00000425836 CHRNB3Q05901 458 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 GABPB1Q06547 395 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-209ENST00000425836 PDK3Q15120 406 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 FAM98BQ52LJ0 330 aaKnown RBP21.8■■□□□ 1.08
VEGFA-209ENST00000425836 ADGRG5Q8IZF4 528 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 C10orf53Q8N6V4 93 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 UTP4Q969X6 686 aaKnown RBP21.8■■□□□ 1.08
VEGFA-209ENST00000425836 DHRS1Q96LJ7 313 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 ANKRD19PQ9H560 264 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 SEC14L4Q9UDX3 406 aa21.8■■□□□ 1.08
VEGFA-209ENST00000425836 DIDO1Q9BTC0 2240 aaKnown RBP21.79■■□□□ 1.08
VEGFA-209ENST00000425836 A0A1W2PRQ8 180 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 CH25HO95992 272 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 YES1P07947 543 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 GTF2E2P29084 291 aaKnown RBP21.79■■□□□ 1.08
VEGFA-209ENST00000425836 AGTR1P30556 359 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 CTBP2P56545 445 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 DGCR6Q14129 220 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 MFSD13AQ14CX5 517 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF74Q16587 644 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 SLC25A35Q3KQZ1 300 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms