RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SDHAF4Q5VUM1 108 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 STEAP1BQ6NZ63 245 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ARMCX5Q6P1M9 558 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CD300LGQ6UXG3 332 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 OR2W3Q7Z3T1 314 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SETD3Q86TU7 594 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TAC4Q86UU9 113 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ITIH5Q86UX2 942 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF677Q86XU0 584 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 HPS6Q86YV9 775 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM139Q8IV31 216 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ZC3H3Q8IXZ2 948 aaKnown RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SLC39A11Q8N1S5 342 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 KIF2BQ8N4N8 673 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 KLHDC1Q8N7A1 406 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CDRT4Q8N9R6 151 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 OR5R1Q8NH85 324 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PLPPR1Q8TBJ4 325 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 DTD1Q8TEA8 209 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SMAP2Q8WU79 429 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 DYDC1Q8WWB3 177 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PYDC1Q8WXC3 89 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PIK3R3Q92569 461 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 STMN2Q93045 179 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM143Q96AN5 459 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 EME1Q96AY2 570 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 C18orf25Q96B23 403 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 APH1AQ96BI3 265 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CCDC126Q96EE4 140 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ITCHQ96J02 903 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 RPP25Q9BUL9 199 aaKnown RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 RAB34Q9BZG1 259 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SPRY4Q9C004 299 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ELOVL4Q9GZR5 314 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 C6orf62Q9GZU0 229 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 DEFB129Q9H1M3 183 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PPA2Q9H2U2 334 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 NHEJ1Q9H9Q4 299 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 C12orf10Q9HB07 376 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 MLXIPLQ9NP71 852 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SIRT7Q9NRC8 400 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 OLFML3Q9NRN5 406 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 THSD1Q9NS62 852 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 C19orf12Q9NSK7 152 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TAS2R9Q9NYW1 312 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 UVRAGQ9P2Y5 699 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ZDHHC2Q9UIJ5 367 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 FBXL4Q9UKA2 621 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PILRBQ9UKJ0 227 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 AP3M1Q9Y2T2 418 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 POLR3HQ9Y535 204 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 MN1Q10571 1320 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 NSG1A0A0A6YYJ2 146 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 LRIT2A6NDA9 550 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 SLC22A20A6NK97 555 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PDHXO00330 501 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 NDUFS7O75251 213 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 UGT2B17O75795 530 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ANXA9O76027 345 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 TOXO94900 526 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 RHOCP08134 193 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CHRM5P08912 532 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CALM1P0DP23 149 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CALM2P0DP24 149 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CALM3P0DP25 149 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 BCKDHAP12694 445 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 HOXB2P14652 356 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 IDO1P14902 403 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 DPEP1P16444 411 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CTRB1P17538 263 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PSMC3P17980 439 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ATF6P18850 670 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 NPR2P20594 1047 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 M6PRP20645 277 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 CXCR2P25025 360 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 FASP25445 335 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ALDH3A1P30838 453 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 RPL4P36578 427 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 NSG1P42857 185 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MAGEA3P43357 314 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MAGEA6P43360 314 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 ALDH3B2P48448 385 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 TMED10P49755 219 aaKnown RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 EMDP50402 254 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 XKP51811 444 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PKNOX1P55347 436 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 KRTAP10-9P60411 292 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 RGS1Q08116 209 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 TAF10Q12962 218 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 MFAP5Q13361 173 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 NAB1Q13506 487 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 DPYSL3Q14195 570 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 PSG5Q15238 335 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 GUK1Q16774 197 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 UPP1Q16831 310 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 KCTD19Q17RG1 926 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-205ENST00000424674 LRRC37A5PQ49AS3 106 aa3.23□□□□□ -1.89
SF3B1-205ENST00000424674 TP53I3Q53FA7 332 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms