RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PPP1R42Q7Z4L9 355 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 FAM151AQ8WW52 585 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 PIGCQ92535 297 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 EMG1Q92979 244 aaKnown RBP2.32□□□□□ -2.04
LINC00397-201ENST00000422074 CXorf40BQ96DE9 158 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 TMEM101Q96IK0 257 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 NAT9Q9BTE0 207 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 LRRN3Q9H3W5 708 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 RBKSQ9H477 322 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 GORASP2Q9H8Y8 452 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 NHEJ1Q9H9Q4 299 aaPredicted RBP2.32□□□□□ -2.04
LINC00397-201ENST00000422074 PATZ1Q9HBE1 687 aaKnown RBP2.32□□□□□ -2.04
LINC00397-201ENST00000422074 POLE4Q9NR33 117 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 UFSP2Q9NUQ7 469 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 THUMPD1Q9NXG2 353 aaKnown RBP2.32□□□□□ -2.04
LINC00397-201ENST00000422074 BFARQ9NZS9 450 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 TMCC3Q9ULS5 477 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 TMCO1Q9UM00 188 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 CDH10Q9Y6N8 788 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 PTCH1Q13635 1447 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 IGHV3OR16-13A0A075B7E8 117 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 GOLGA8SH3BPF8 625 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 MBTPS2O43462 519 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF780AO75290 641 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 SNNO75324 88 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 DIRAS1O95057 198 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 OXSR1O95747 527 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 LGI1O95970 557 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 GIPP09681 153 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 HTR1EP28566 365 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 PRDX3P30048 256 aaKnown RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 SHMT2P34897 504 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 GRIA1P42261 906 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 GLP1RP43220 463 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 ASPHQ12797 758 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 OXA1LQ15070 435 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 PDK3Q15120 406 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 MICBQ29980 383 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 KLF17Q5JT82 389 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 MARCH8Q5T0T0 291 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 CYB5R2Q6BCY4 276 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 OR4F3Q6IEY1 312 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 C11orf71Q6IPW1 123 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 Q6ZPB1 254 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 RGS9BPQ6ZS82 235 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 NLRP9Q7RTR0 991 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 TPRX1Q8N7U7 411 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 STEAP2Q8NFT2 490 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 IPMKQ8NFU5 416 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 OR4K14Q8NGD5 310 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 BRSK1Q8TDC3 778 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 MYDGFQ969H8 173 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 UBE2E3Q969T4 207 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 PAGE5Q96GU1 130 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 TSG101Q99816 390 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 SLC39A3Q9BRY0 314 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 CHRDL1Q9BU40 450 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 SUDS3Q9H7L9 328 aaPredicted RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 KIF25Q9UIL4 384 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 CDH9Q9ULB4 789 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 STAP1Q9ULZ2 295 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 CLEC4AQ9UMR7 237 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 RPL36Q9Y3U8 105 aaKnown RBP2.31□□□□□ -2.04
LINC00397-201ENST00000422074 TIMM10BQ9Y5J6 103 aa2.31□□□□□ -2.04
LINC00397-201ENST00000422074 TRAV26-1A0A087WT03 109 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 TCRBV9S1A1TA0A576 114 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 STAMBPO95630 424 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 OPN1MWP04001 364 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 OPN1MW2P0DN77 364 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 OPN1MW3P0DN78 364 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 POU2F1P14859 743 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 CALRP27797 417 aaKnown RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 CCR1P32246 355 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 KIR2DS4P43632 304 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 ARRB1P49407 418 aaPredicted RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 CEBPDP49716 269 aaPredicted RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 HNMTP50135 292 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 KPNA2P52292 529 aaKnown RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 EFNB2P52799 333 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 GBX2P52951 348 aaPredicted RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 AIF1P55008 147 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 TAS2R19P59542 299 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 C1orf61Q13536 156 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF630Q2M218 657 aaPredicted RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 PARP15Q460N3 678 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 SLC26A11Q86WA9 606 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 PNKDQ8N490 385 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 OR52H1Q8NGJ2 320 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 OR51S1Q8NGJ8 323 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 FANK1Q8TC84 345 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 TIMD4Q96H15 378 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 SECISBP2Q96T21 854 aaKnown RBP2.3□□□□□ -2.04
LINC00397-201ENST00000422074 RNF2Q99496 336 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 COPS8Q99627 209 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 NPAS2Q99743 824 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 P2RY13Q9BPV8 354 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 TMEM43Q9BTV4 400 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 ACTR6Q9GZN1 396 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 ROGDIQ9GZN7 287 aa2.3□□□□□ -2.04
LINC00397-201ENST00000422074 NXF3Q9H4D5 531 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms