RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CD69Q07108 199 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 SLC3A1Q07837 685 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 MERTKQ12866 999 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 NPRL3Q12980 569 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 DUSP5Q16690 384 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 GLIPR1L2Q4G1C9 344 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 TMEM154Q6P9G4 183 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 PAQR6Q6TCH4 344 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 LRIG3Q6UXM1 1119 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 CCDC91Q7Z6B0 441 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 LRP11Q86VZ4 500 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 ZBED8Q8IZ13 594 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 TMCO5AQ8N6Q1 288 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 COX18Q8N8Q8 333 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 ZNF454Q8N9F8 522 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 ZIC4Q8N9L1 334 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 ZSCAN4Q8NAM6 433 aaPredicted RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 OR4F6Q8NGB9 312 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 GRK7Q8WTQ7 553 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 SSMEM1Q8WWF3 244 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 AURKBQ96GD4 344 aaPredicted RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 ALKBH3Q96Q83 286 aaPredicted RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 CPNE1Q99829 537 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 BTBD2Q9BX70 525 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 LINC00470Q9BZP3 86 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 IQCGQ9H095 443 aaKnown RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 MARCH7Q9H992 704 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 NPHS2Q9NP85 383 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 HINT3Q9NQE9 182 aaKnown RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 DUSP22Q9NRW4 184 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 ACER3Q9NUN7 267 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 SIRT5Q9NXA8 310 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 TMEM181Q9P2C4 612 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 TXNDC16Q9P2K2 825 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 MYEF2Q9P2K5 600 aaKnown RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 IL20RAQ9UHF4 553 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 DTNAQ9Y4J8 743 aa7.61□□□□□ -1.19
TRIM39-206ENST00000420746 SOX21Q9Y651 276 aaPredicted RBP7.61□□□□□ -1.19
TRIM39-206ENST00000420746 A0A096LPK6 155 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 LCE6AA0A183 80 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 SLC22A23A1A5C7 686 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 NPIPB9F8W1W9 429 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 H0YL77 283 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 RPL36A-HNRNPH2H7BZ11 118 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 UBL4AP11441 157 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 ATP6V1C1P21283 382 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 CRABP2P29373 138 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 CCR4P51679 360 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 ATP12AP54707 1039 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 OR2B6P58173 313 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 ZNF763Q0D2J5 394 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 NKPD1Q17RQ9 610 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 PRSS53Q2L4Q9 553 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 NDUFAF6Q330K2 333 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 HP1BP3Q5SSJ5 553 aaPredicted RBP7.6□□□□□ -1.19
TRIM39-206ENST00000420746 CCNJQ5T5M9 372 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 FOXB2Q5VYV0 432 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 RAPH1Q70E73 1250 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 JAZF1Q86VZ6 243 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 ADAMTS15Q8TE58 950 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 CDKL2Q92772 493 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 ELMOD3Q96FG2 381 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 ZNF385AQ96PM9 386 aaKnown RBP7.6□□□□□ -1.19
TRIM39-206ENST00000420746 DIRC2Q96SL1 478 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 STACQ99469 402 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 CCDC106Q9BWC9 280 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 DENND2DQ9H6A0 471 aaPredicted RBP7.6□□□□□ -1.19
TRIM39-206ENST00000420746 MIEF1Q9NQG6 463 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 PCTPQ9UKL6 214 aa7.6□□□□□ -1.19
TRIM39-206ENST00000420746 TET2Q6N021 2002 aaPredicted RBP7.6□□□□□ -1.19
TRIM39-206ENST00000420746 TRAV40A0A0B4J280 105 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 TMEM229AB2RXF0 380 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 STX16-NPEPL1H3BU86 382 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 STX16O14662 325 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 GPR137BO60478 399 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 RSL1D1O76021 490 aaKnown RBP7.59□□□□□ -1.19
TRIM39-206ENST00000420746 ZNF432O94892 652 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 OTCP00480 354 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 MELTFP08582 738 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 BCKDHAP12694 445 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 IVDP26440 423 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 SLC6A9P48067 706 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 FNTAP49354 379 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 SELENOVP59797 346 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 ACSM2AQ08AH3 577 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 SKP2Q13309 424 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 HERPUD1Q15011 391 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 FAM83EQ2M2I3 478 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 TRMT5Q32P41 509 aaKnown RBP7.59□□□□□ -1.19
TRIM39-206ENST00000420746 GKAP1Q5VSY0 366 aaPredicted RBP7.59□□□□□ -1.19
TRIM39-206ENST00000420746 ACSM2BQ68CK6 577 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 FAM71E1Q6IPT2 247 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 LETMD1Q6P1Q0 360 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 LRRN1Q6UXK5 716 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 Q6ZSV7 163 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 USP51Q70EK9 711 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 MDP1Q86V88 176 aa7.59□□□□□ -1.19
TRIM39-206ENST00000420746 OR9K2Q8NGE7 335 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms