RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GPX7Q96SL4 187 aaPredicted RBP19■□□□□ 0.63
GPC1-202ENST00000420138 MED20Q9H944 212 aa19■□□□□ 0.63
GPC1-202ENST00000420138 SH2D2AQ9NP31 389 aa19■□□□□ 0.63
GPC1-202ENST00000420138 FGF20Q9NP95 211 aaPredicted RBP19■□□□□ 0.63
GPC1-202ENST00000420138 NRIP3Q9NQ35 241 aa19■□□□□ 0.63
GPC1-202ENST00000420138 P4HTMQ9NXG6 502 aa19■□□□□ 0.63
GPC1-202ENST00000420138 TMED7Q9Y3B3 224 aa19■□□□□ 0.63
GPC1-202ENST00000420138 TNFSF12-TNFSF13A0A0A6YY99 330 aa19■□□□□ 0.63
GPC1-202ENST00000420138 SUSD5O60279 629 aa19■□□□□ 0.63
GPC1-202ENST00000420138 APOL3O95236 402 aa19■□□□□ 0.63
GPC1-202ENST00000420138 BGLAPP02818 100 aa19■□□□□ 0.63
GPC1-202ENST00000420138 UQCRC1P31930 480 aa19■□□□□ 0.63
GPC1-202ENST00000420138 RPS5P46782 204 aaKnown RBP19■□□□□ 0.63
GPC1-202ENST00000420138 SERPINB10P48595 397 aa19■□□□□ 0.63
GPC1-202ENST00000420138 RAB40BQ12829 278 aa19■□□□□ 0.63
GPC1-202ENST00000420138 NIPAL3Q6P499 406 aa19■□□□□ 0.63
GPC1-202ENST00000420138 TMEM81Q6P7N7 255 aa19■□□□□ 0.63
GPC1-202ENST00000420138 OPN5Q6U736 354 aa19■□□□□ 0.63
GPC1-202ENST00000420138 IL20RBQ6UXL0 311 aa19■□□□□ 0.63
GPC1-202ENST00000420138 DPY19L2P2Q6ZN68 376 aa19■□□□□ 0.63
GPC1-202ENST00000420138 LINC00299Q6ZSB3 139 aa19■□□□□ 0.63
GPC1-202ENST00000420138 ZBTB46Q86UZ6 589 aa19■□□□□ 0.63
GPC1-202ENST00000420138 DYNC2LI1Q8TCX1 351 aa19■□□□□ 0.63
GPC1-202ENST00000420138 RPL3LQ92901 407 aaKnown RBP19■□□□□ 0.63
GPC1-202ENST00000420138 RFKQ969G6 155 aa19■□□□□ 0.63
GPC1-202ENST00000420138 FRMD6Q96NE9 622 aa19■□□□□ 0.63
GPC1-202ENST00000420138 ERMAPQ96PL5 475 aaPredicted RBP19■□□□□ 0.63
GPC1-202ENST00000420138 CPNE5Q9HCH3 593 aa19■□□□□ 0.63
GPC1-202ENST00000420138 NANSQ9NR45 359 aa19■□□□□ 0.63
GPC1-202ENST00000420138 ADAM18Q9Y3Q7 739 aa19■□□□□ 0.63
GPC1-202ENST00000420138 PCDHGB6Q9Y5F9 930 aa19■□□□□ 0.63
GPC1-202ENST00000420138 CNOT1A5YKK6 2376 aaKnown RBP18.99■□□□□ 0.63
GPC1-202ENST00000420138 SNTNA6NMZ2 147 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 STMND1H3BQB6 276 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 AIREO43918 545 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 ICAM2P13598 275 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 NOS3P29474 1203 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 AQP2P41181 271 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 ITGADQ13349 1161 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 CRMP1Q14194 572 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 KLHL22Q53GT1 634 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 ARMCX4Q5H9R4 360 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 H3F3CQ6NXT2 135 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 PAQR6Q6TCH4 344 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 PPP4R1LQ9P1A2 415 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 IER3IP1Q9Y5U9 82 aa18.99■□□□□ 0.63
GPC1-202ENST00000420138 MRPS18BQ9Y676 258 aaKnown RBP18.99■□□□□ 0.63
GPC1-202ENST00000420138 TRAV36DV7A0A075B6V5 113 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 ARPC3O15145 178 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 RAB36O95755 333 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 MSX1P28360 303 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 RBMS1P29558 406 aaKnown RBP18.98■□□□□ 0.63
GPC1-202ENST00000420138 CLK1P49759 484 aaKnown RBP18.98■□□□□ 0.63
GPC1-202ENST00000420138 SSR4P51571 173 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 PRPS1P60891 318 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 ARHGAP11AQ6P4F7 1023 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 C10orf53Q8N6V4 93 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 WDSUB1Q8N9V3 476 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 SLC37A3Q8NCC5 494 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 TMEM234Q8WY98 164 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 KISS1RQ969F8 398 aaPredicted RBP18.98■□□□□ 0.63
GPC1-202ENST00000420138 FKRPQ9H9S5 495 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 PROK2Q9HC23 129 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 ZNF229Q9UJW7 825 aa18.98■□□□□ 0.63
GPC1-202ENST00000420138 A8MVM7 634 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 TP53I11O14683 189 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 HIST1H1CP16403 213 aaKnown RBP18.97■□□□□ 0.63
GPC1-202ENST00000420138 HK1P19367 917 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 UGT2B10P36537 528 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 HTR3AP46098 478 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ETV1P50549 477 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 SNTA1Q13424 505 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ZNF468Q5VIY5 522 aaPredicted RBP18.97■□□□□ 0.63
GPC1-202ENST00000420138 SHFQ7M4L6 423 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 TMPRSS7Q7RTY8 843 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 NANOGP1Q8N7R0 232 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 FADS6Q8N9I5 356 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 OR2M3Q8NG83 312 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ADAMTS17Q8TE56 1095 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ASB15Q8WXK1 588 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 SECISBP2Q96T21 854 aaKnown RBP18.97■□□□□ 0.63
GPC1-202ENST00000420138 DDOQ99489 341 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 SDHAF3Q9NRP4 125 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 DLL3Q9NYJ7 618 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 EXOGQ9Y2C4 368 aaKnown RBP18.97■□□□□ 0.63
GPC1-202ENST00000420138 PCNX3Q9H6A9 2034 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 CCDC182A6NF36 153 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 BLOC1S5-TXNDC5H3BN57 136 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 J3QRE1 110 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 SLC2A5P22732 501 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 GADD45AP24522 165 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 FOXF1Q12946 379 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 SLC25A53Q5H9E4 307 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 PRAMEF20Q5VT98 475 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 B3GLCTQ6Y288 498 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 MEPCEQ7L2J0 689 aaKnown RBP18.97■□□□□ 0.63
GPC1-202ENST00000420138 FAM122BQ7Z309 247 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 ADCK1Q86TW2 530 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 GID4Q8IVV7 300 aa18.97■□□□□ 0.63
GPC1-202ENST00000420138 CYB561A3Q8NBI2 242 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms