RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 C12orf43Q96C57 262 aaKnown RBP4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 WDR34Q96EX3 536 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 IP6K3Q96PC2 410 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 TMEM246Q9BRR3 403 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 NTMT1Q9BV86 223 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 ZNF416Q9BWM5 594 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 PINK1Q9BXM7 581 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 VN1R1Q9GZP7 353 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 ING2Q9H160 280 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 KLHL31Q9H511 634 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 MKKSQ9NPJ1 570 aaPredicted RBP4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 ACOXLQ9NUZ1 547 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 EXD2Q9NVH0 621 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 CMTM6Q9NX76 183 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 P4HTMQ9NXG6 502 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 NKIRAS1Q9NYS0 192 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 GLTPQ9NZD2 209 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 COPG2Q9UBF2 871 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 ENPP5Q9UJA9 477 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 C3orf18Q9UK00 162 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 FBXL4Q9UKA2 621 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 PCTPQ9UKL6 214 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 CDC14AQ9UNH5 594 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 GAB2Q9UQC2 676 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 NAALAD2Q9Y3Q0 740 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 HS3ST3B1Q9Y662 390 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 SLC22A7Q9Y694 548 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 CPAMD8Q8IZJ3 1885 aa4.45□□□□□ -1.7
ATG4AP1-201ENST00000416893 APCP25054 2843 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 A0A0G2JN53 185 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 A0A1W2PPM1 405 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TMEM120BA0PK00 339 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 URADA6NGE7 173 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ANKDD1BA6NHY2 528 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TMEM210A6NLX4 147 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 LEUTXA8MZ59 168 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 IDSB3KWA1 339 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 HSBP1L1C9JCN9 74 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 LOC110117498-PIK3R3F6TDL0 507 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 H0YIG0 161 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 H0YIV9 168 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 H3BNH8 94 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 MKRN2OSH3BPM6 223 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 J3KTA2 159 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 PEX12O00623 359 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SOCS6O14544 535 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 STX16O14662 325 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TFECO14948 347 aaPredicted RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 PIP5K1BO14986 540 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TM9SF1O15321 606 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ERI3O43414 337 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 PLOD3O60568 738 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 UGDHO60701 494 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 PRAMEF2O60811 474 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 EDF1O60869 148 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ALOX12BO75342 701 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SH3BGRLO75368 114 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 CCNB2O95067 398 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TBX6O95947 436 aaPredicted RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 MBPP02686 304 aaPredicted RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 OPN1LWP04000 364 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 FHP07954 510 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ITGA5P08648 1049 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 HOXD4P09016 255 aaPredicted RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SMIM6P0DI80 62 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SMIM10L1P0DMW3 83 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 RNH1P13489 461 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 PRG2P13727 222 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TAC1P20366 129 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 CD40LGP29965 261 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ERP29P30040 261 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 HPCAL1P37235 193 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 GSTM5P46439 218 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 MEOX2P50222 304 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 EFNA3P52797 238 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SUCLG1P53597 346 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 PLA2G16P53816 162 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 EMP2P54851 167 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 RAB8AP61006 207 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SKP1P63208 163 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 CD300CQ08708 224 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 FOXO1Q12778 655 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 TRAF3Q13114 568 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 DDX39BQ13838 428 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 LARS2Q15031 903 aaKnown RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 HIST2H2ACQ16777 129 aaPredicted RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ADPRMQ3LIE5 342 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SFT2D3Q587I9 215 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 DCAF10Q5QP82 559 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 UBE2UQ5VVX9 321 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 RSBN1Q5VWQ0 802 aaPredicted RBP4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 HIST2H2AA3Q6FI13 130 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 CGB2Q6NT52 195 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 MED27Q6P2C8 311 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ZFP1Q6P2D0 407 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SLC16A12Q6ZSM3 486 aa4.44□□□□□ -1.7
ATG4AP1-201ENST00000416893 SH2D5Q6ZV89 423 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms