RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 P2RX2Q9UBL9 471 aa12.63□□□□□ -0.39
PAF1-202ENST00000416728 ANK3Q12955 4377 aaKnown RBP12.63□□□□□ -0.39
PAF1-202ENST00000416728 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
PAF1-202ENST00000416728 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 KRT33AO76009 404 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 COPZ1P61923 177 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 TMEM225Q6GV28 225 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 WBP2NLQ6ICG8 309 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 VRK2Q86Y07 508 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 CADM2Q8N3J6 435 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 ZIC4Q8N9L1 334 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
PAF1-202ENST00000416728 OR52P1PQ8NH57 321 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 C10orf105Q8TEF2 133 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 TMEM158Q8WZ71 300 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 PROX1Q92786 737 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 TAPBPLQ9BX59 468 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 PIF1Q9H611 641 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 WDR55Q9H6Y2 383 aaPredicted RBP12.62□□□□□ -0.39
PAF1-202ENST00000416728 ADPRHL2Q9NX46 363 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 CALML5Q9NZT1 146 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.62□□□□□ -0.39
PAF1-202ENST00000416728 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 MOKQ9UQ07 419 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 GPR45Q9Y5Y3 372 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 V9GYY5 206 aaPredicted RBP12.62□□□□□ -0.39
PAF1-202ENST00000416728 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 PLCE1Q9P212 2302 aa12.62□□□□□ -0.39
PAF1-202ENST00000416728 KLF11O14901 512 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
PAF1-202ENST00000416728 EPHA3P29320 983 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 CRISP3P54108 245 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 MAPK11Q15759 364 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 HIKESHIQ53FT3 197 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 CEP85LQ5SZL2 805 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 HHATQ5VTY9 493 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 ZNF836Q6ZNA1 936 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 PHC2Q8IXK0 858 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
PAF1-202ENST00000416728 FBXO17Q96EF6 278 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 AURKBQ96GD4 344 aaPredicted RBP12.61□□□□□ -0.39
PAF1-202ENST00000416728 KCNS3Q9BQ31 491 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 BEX2Q9BXY8 128 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 CACYBPQ9HB71 228 aaKnown RBP12.61□□□□□ -0.39
PAF1-202ENST00000416728 OBP2BQ9NPH6 170 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 TMEM45AQ9NWC5 275 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 FKBP7Q9Y680 259 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 DSPPQ9NZW4 1301 aa12.61□□□□□ -0.39
PAF1-202ENST00000416728 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 A8MVM7 634 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 HDAC3O15379 428 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 LY6HO94772 140 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 VAMP5O95183 116 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 ANP32DO95626 131 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
PAF1-202ENST00000416728 IL6P05231 212 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 BCHEP06276 602 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 ETFAP13804 333 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 IDO1P14902 403 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 NCF2P19878 526 aaPredicted RBP12.6□□□□□ -0.39
PAF1-202ENST00000416728 ACAA2P42765 397 aaKnown RBP12.6□□□□□ -0.39
PAF1-202ENST00000416728 CRATP43155 626 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 BNIP2Q12982 314 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 LARS2Q15031 903 aaKnown RBP12.6□□□□□ -0.39
PAF1-202ENST00000416728 TBRG1Q3YBR2 411 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 TNFAIP8L3Q5GJ75 292 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 RNF220Q5VTB9 566 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 PRAMEF8Q5VWM4 474 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 PRAMEF7Q5VXH5 474 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 CYB5R2Q6BCY4 276 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 NXNQ6DKJ4 435 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 ANKRD42Q8N9B4 389 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 ZBTB9Q96C00 473 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 BOD1Q96IK1 185 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 SLC6A13Q9NSD5 602 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 ZNF443Q9Y2A4 671 aaPredicted RBP12.6□□□□□ -0.39
PAF1-202ENST00000416728 STAB1Q9NY15 2570 aa12.6□□□□□ -0.39
PAF1-202ENST00000416728 A0A096LPI6 279 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 TMEM247A6NEH6 219 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 OR6C65A6NJZ3 312 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
PAF1-202ENST00000416728 FRS3O43559 492 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 SLC22A3O75751 556 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 LGI1O95970 557 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 IGHV4-31P0DP07 118 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 ZNF16P17020 682 aaPredicted RBP12.59□□□□□ -0.39
PAF1-202ENST00000416728 PAX7P23759 505 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 MVDP53602 400 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 DSTNP60981 165 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 UBE2NP61088 152 aaKnown RBP12.59□□□□□ -0.39
PAF1-202ENST00000416728 SNRPD2P62316 118 aaKnown RBP12.59□□□□□ -0.39
PAF1-202ENST00000416728 ZSWIM7Q19AV6 140 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms