RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 NT5CQ8TCD5 201 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 SMAP2Q8WU79 429 aaPredicted RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 IGFBPL1Q8WX77 278 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 KRT35Q92764 455 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 STARD4Q96DR4 205 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 SNF8Q96H20 258 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 MARK4Q96L34 752 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 BIRC8Q96P09 236 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 CSF3RQ99062 836 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 OSBPL8Q9BZF1 889 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 NPFFR1Q9GZQ6 430 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 NAT10Q9H0A0 1025 aaKnown RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 WNT5BQ9H1J7 359 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 SPNS1Q9H2V7 528 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 ESRP2Q9H6T0 727 aaKnown RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 CLK4Q9HAZ1 481 aaKnown RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 PROK2Q9HC23 129 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 EML4Q9HC35 981 aaKnown RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 CHRAC1Q9NRG0 131 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 ACSS1Q9NUB1 689 aaPredicted RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 ZNHIT6Q9NWK9 470 aaKnown RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 ELOVL5Q9NYP7 299 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 IL36RNQ9UBH0 155 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 DNAJB9Q9UBS3 223 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 C15orf41Q9Y2V0 281 aa4.01□□□□□ -1.77
PTPRK-210ENST00000415055 CHCHD2Q9Y6H1 151 aaPredicted RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 PRKDCP78527 4128 aaKnown RBP4.01□□□□□ -1.77
PTPRK-210ENST00000415055 TNFSF12-TNFSF13A0A0A6YY99 330 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 IQANK1A0A1B0GTG1 560 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SLC22A20A6NK97 555 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 LINC01548A6NM66 108 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 C4orf51C9J302 202 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 CDC7O00311 574 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 CTNSO60931 367 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 TRIM3O75382 744 aaPredicted RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 SLC22A3O75751 556 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 ZNF189O75820 626 aaPredicted RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 TNFSF13O75888 250 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SNX4O95219 450 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 ETHE1O95571 254 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 TGM6O95932 706 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 IFNB1P01574 187 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 HPNP05981 417 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 APRTP07741 180 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 F7P08709 466 aaPredicted RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 HIST1H2AGP0C0S8 130 aaPredicted RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 MPC1LP0DKB6 136 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 IGHV4-31P0DP07 118 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 PTNP21246 168 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 NMBRP28336 390 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 MPGP29372 298 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 AHRP35869 848 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 STARP49675 285 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 FBXW4P57775 412 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 STX1BP61266 288 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 CSNK2A1P68400 391 aaPredicted RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 RPP38P78345 283 aaKnown RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 ACVR1Q04771 509 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SPOCK1Q08629 439 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SERTAD2Q14140 314 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 EFTUD2Q15029 972 aaKnown RBP eCLIP4□□□□□ -1.77
PTPRK-210ENST00000415055 DECR1Q16698 335 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 ZNF674Q2M3X9 581 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 NHSL2Q5HYW2 709 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 CEP78Q5JTW2 689 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 OR2A2Q6IF42 318 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SBSNQ6UWP8 590 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 ANGPTL8Q6UXH0 198 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 ZNF66Q6ZN08 573 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 TMPRSS11BQ86T26 416 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 IFNEQ86WN2 208 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 C9orf40Q8IXQ3 194 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 KLHDC8AQ8IYD2 350 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 CPNE9Q8IYJ1 553 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 DND1Q8IYX4 353 aaKnown RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 PRR22Q8IZ63 422 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 RFLNBQ8N5W9 214 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 BANPQ8N9N5 519 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 RBM15BQ8NDT2 890 aaKnown RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 CSNK2A3Q8NEV1 391 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 PSMA8Q8TAA3 256 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 MPLKIPQ8TAP9 179 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 NUBPLQ8TB37 319 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 RAB3IL1Q8TBN0 382 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 ZNF721Q8TF20 911 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SLC5A11Q8WWX8 675 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 DDB2Q92466 427 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 CORO2AQ92828 525 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 NEUROG1Q92886 237 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 EXT2Q93063 718 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 RBM18Q96H35 190 aaKnown RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 SENP5Q96HI0 755 aaPredicted RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 SIGLEC11Q96RL6 698 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 SEPHS2Q99611 448 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 GPR21Q99679 349 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 AIF1LQ9BQI0 150 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 PPIL3Q9H2H8 161 aaKnown RBP4□□□□□ -1.77
PTPRK-210ENST00000415055 UBQLN3Q9H347 655 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 METTL7AQ9H8H3 244 aa4□□□□□ -1.77
PTPRK-210ENST00000415055 PARVBQ9HBI1 364 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms