RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PCDHGA9Q9Y5G4 932 aaKnown RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 PCNX3Q9H6A9 2034 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 ADAM10O14672 748 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 FRS3O43559 492 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 TLX2O43763 284 aaPredicted RBP9.06□□□□□ -0.96
DDB1-202ENST00000414411 KIAA0513O60268 411 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 FADS1O60427 444 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 CYP7B1O75881 506 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 WDPCPO95876 746 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 NGFRP08138 427 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 RPS4Y1P22090 263 aaKnown RBP9.06□□□□□ -0.96
DDB1-202ENST00000414411 CD96P40200 585 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 TMED10P49755 219 aaKnown RBP9.06□□□□□ -0.96
DDB1-202ENST00000414411 SMSP52788 366 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 EFNB1P98172 346 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDB1-202ENST00000414411 TRAM2Q15035 370 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 SPHARQ15513 63 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 ZNF141Q15928 474 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 MAPK14Q16539 360 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 ACSM5Q6NUN0 579 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 IL20RBQ6UXL0 311 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 APOOLQ6UXV4 268 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 LINC00696Q6ZRV3 163 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 CYP4Z2PQ8N1L4 340 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 ZNF619Q8N2I2 560 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 TMEM156Q8N614 296 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 TTC9Q92623 222 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 HAS2Q92819 552 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 SGCZQ96LD1 299 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 PRORYQ9H606 182 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 UBQLN4Q9NRR5 601 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 FLRT3Q9NZU0 649 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 RABL2BQ9UNT1 228 aa9.06□□□□□ -0.96
DDB1-202ENST00000414411 CHCHD2Q9Y6H1 151 aaPredicted RBP9.06□□□□□ -0.96
DDB1-202ENST00000414411 CENPVL1A0A0U1RR11 272 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 CPSF4LA6NMK7 179 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 BOLA2-SMG1P6H3BVE0 249 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 GPX5O75715 221 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 UTS2O95399 124 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 TBXA2RP21731 343 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 IL12BP29460 328 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 IFNGR2P38484 337 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 RFX3P48380 749 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 CYB561P49447 251 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ATP12AP54707 1039 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 RPS3AP61247 264 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 PRKCDQ05655 676 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ST3GAL3Q11203 375 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 TSPAN31Q12999 210 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 EFR3AQ14156 821 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 GPR68Q15743 365 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 FLYWCH1Q4VC44 716 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 KLHL26Q53HC5 615 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 TMEM81Q6P7N7 255 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 IGFL3Q6UXB1 125 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 PLEKHG7Q6ZR37 379 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 GPALPP1Q8IXQ4 340 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 CLIP4Q8N3C7 705 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 NANOGP1Q8N7R0 232 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 PROKR2Q8NFJ6 384 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OR10G3Q8NGC4 313 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OR52P1PQ8NH57 321 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 TEX47Q8TBZ9 253 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 GNPDA2Q8TDQ7 276 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 PAQR8Q8TEZ7 354 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OIT3Q8WWZ8 545 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 LRR1Q96L50 414 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ZNF582Q96NG8 517 aaPredicted RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 SECISBP2Q96T21 854 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 HOXD1Q9GZZ0 328 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 EGLN3Q9H6Z9 239 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 KLHL28Q9NXS3 571 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 DIMT1Q9UNQ2 313 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 HEATR5AQ86XA9 2040 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 TNRC6AQ8NDV7 1962 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 NPIPA5A0A0B4J1W7 369 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 NPIPA7E9PJI5 369 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ICOSLGO75144 302 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 UPK1BO75841 260 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 NEURL1O76050 574 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 NPIPA8P0DM63 369 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 IFNA8P32881 189 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 S100A5P33763 92 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 SOX6P35712 828 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OMPP47874 163 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 RGS8P57771 180 aaPredicted RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 MLLT11Q13015 90 aaPredicted RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 C1DQ13901 141 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 SLC27A4Q6P1M0 643 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 ZNF730Q6ZMV8 503 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 GDPGP1Q6ZNW5 385 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 RASSF6Q6ZTQ3 369 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 MDGA2Q7Z553 956 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 MEX3DQ86XN8 651 aaKnown RBP9.05□□□□□ -0.96
DDB1-202ENST00000414411 POGLUT1Q8NBL1 392 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OR52I1Q8NGK6 324 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OR8D4Q8NGM9 314 aa9.05□□□□□ -0.96
DDB1-202ENST00000414411 OR5M3Q8NGP4 307 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms