RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SLC41A3Q96GZ6 507 aa15.25■□□□□ 0.03
SCAMP4-204ENST00000414057 FEVQ99581 238 aa15.25■□□□□ 0.03
SCAMP4-204ENST00000414057 TMEM27Q9HBJ8 222 aa15.25■□□□□ 0.03
SCAMP4-204ENST00000414057 SDHAF3Q9NRP4 125 aa15.25■□□□□ 0.03
SCAMP4-204ENST00000414057 MAN2C1Q9NTJ4 1040 aa15.25■□□□□ 0.03
SCAMP4-204ENST00000414057 TRBV4-1A0A0J9YWV2 114 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 C2orf72A6NCS6 295 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 CBLP22681 906 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 ADARB1P78563 741 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 IL18R1Q13478 541 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 LAPTM4AQ15012 233 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 OR1Q1Q15612 314 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 FBXL19-AS1Q494R0 122 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 SWT1Q5T5J6 900 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 ZNF770Q6IQ21 691 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 PARP8Q8N3A8 854 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 CYGBQ8WWM9 190 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 RNASE6Q93091 150 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 DGCR6LQ9BY27 220 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 TOR3AQ9H497 397 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 KRCC1Q9NPI7 259 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 PAPOLBQ9NRJ5 636 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 TAS2R10Q9NYW0 307 aa15.24■□□□□ 0.03
SCAMP4-204ENST00000414057 CSMD2Q7Z408 3487 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 SLC16A6O15403 523 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 ZNF264O43296 627 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 OR10H3O60404 316 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 EIF4E2O60573 245 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 IL18BPO95998 194 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 GKN3PP0CG01 181 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 MYF6P23409 242 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 CTSSP25774 331 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 SLC6A8P48029 635 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 DLX5P56178 289 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 PLAURQ03405 335 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 PODNL1Q6PEZ8 512 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 TSPYL5Q86VY4 417 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 KIF18BQ86Y91 864 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 RELL2Q8NC24 303 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 NAXEQ8NCW5 288 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 PHOSPHO1Q8TCT1 267 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 ACOT11Q8WXI4 607 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 MPP4Q96JB8 637 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 ZFP3Q96NJ6 502 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 TM9SF2Q99805 663 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 GABARAPL3Q9BY60 117 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 TBL1XR1Q9BZK7 514 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 LAT2Q9GZY6 243 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 DKKL1Q9UK85 242 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 EDARQ9UNE0 448 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 HCFC1P51610 2035 aa15.23■□□□□ 0.03
SCAMP4-204ENST00000414057 EXPH5Q8NEV8 1989 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 GTPBP1O00178 669 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 FADS1O60427 444 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 UBTFL6P0CB48 400 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 CHMP24386 653 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 EVI2BP34910 448 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 ACAA2P42765 397 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 UGT2B15P54855 530 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 COPZ1P61923 177 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 HOXC5Q00444 222 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 COX10Q12887 443 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 SKP2Q13309 424 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 PDK3Q15120 406 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 EEF1A1P5Q5VTE0 462 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 USP51Q70EK9 711 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 RRM2BQ7LG56 351 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 RNF113BQ8IZP6 322 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 AQP11Q8NBQ7 271 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 HS6ST2Q96MM7 605 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 SFXN2Q96NB2 322 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 FAM118AQ9NWS6 357 aa15.22■□□□□ 0.03
SCAMP4-204ENST00000414057 A0A0B4J2E0 115 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 A0A1B0GX12 115 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 NDUFB5O43674 189 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 CHP2O43745 196 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 PRG2P13727 222 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 GSTM3P21266 225 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 HTR2AP28223 471 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 DSCR4P56555 118 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 KEAP1Q14145 624 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 SEC23BQ15437 767 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 KRT80Q6KB66 452 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 ULK3Q6PHR2 472 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 CD300LDQ6UXZ3 194 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 OR4K17Q8NGC6 315 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 OR4K5Q8NGD3 323 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 OR9Q2Q8NGE9 314 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 FAM222BQ8WU58 562 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 RNF138Q8WVD3 245 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 DNAJA4Q8WW22 397 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 CNBD2Q96M20 576 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 MBOAT4Q96T53 435 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 CTPS2Q9NRF8 586 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 FLRT3Q9NZU0 649 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 SELENONQ9NZV5 590 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 PPP4R1LQ9P1A2 415 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 RPS6KB2Q9UBS0 482 aa15.21■□□□□ 0.03
SCAMP4-204ENST00000414057 NCKAP5O14513 1909 aa15.21■□□□□ 0.02
SCAMP4-204ENST00000414057 A0A087WUU8 490 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms