RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ITGB7P26010 798 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 GIFP27352 417 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 NTSR1P30989 418 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SDHAP31040 664 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CD80P33681 288 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 S100A3P33764 101 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TAS2R38P59533 333 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SNRPD2P62316 118 aaKnown RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 RAB11AP62491 216 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 RHAGQ02094 409 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CST6Q15828 149 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 RAB11BQ15907 218 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 ALKBH6Q3KRA9 238 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 PODNL1Q6PEZ8 512 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CBLL1Q75N03 491 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 RD3Q7Z3Z2 195 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SERPINA9Q86WD7 417 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 FAM219AQ8IW50 185 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 LAX1Q8IWV1 398 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 GPALPP1Q8IXQ4 340 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SIRT6Q8N6T7 355 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 OR52B6Q8NGF0 335 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 OR9Q1Q8NGQ5 310 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 HOXB13Q92826 284 aaPredicted RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 GPR137Q96N19 417 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 LYSMD1Q96S90 227 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 MYOCQ99972 504 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 ANGPTL4Q9BY76 406 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 IMPAD1Q9NX62 359 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 PRR13Q9NZ81 148 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SLC23A1Q9UHI7 598 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 OSGIN2Q9Y236 505 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 POFUT2Q9Y2G5 429 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TSPAN11A1L157 253 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TUBAL3A6NHL2 446 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 ATP6V1G2-DDX39BF2Z307 99 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 WIPF1O43516 503 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 HLA-DQB1P01920 261 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TSPAN19P0C672 248 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 PSMB6P28072 239 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 VIPR1P32241 457 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 KDELR2P33947 212 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 NTF4P34130 210 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TNFRSF4P43489 277 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SPINT3P49223 89 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 UCP3P55916 312 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CLDN20P56880 219 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 POLR2LP62875 67 aaKnown RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CSNK2A1P68400 391 aaPredicted RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 HEPACAMQ14CZ8 416 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 COL28A1Q2UY09 1125 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 GTDC1Q4AE62 458 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 PYDC2Q56P42 97 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 AGBL4Q5VU57 503 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TEX261Q6UWH6 196 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 PAMR1Q6UXH9 720 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 C9orf62Q8N4C0 152 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CLDN22Q8N7P3 220 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 CSNK2A3Q8NEV1 391 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 OR4M2Q8NGB6 313 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 OR4A15Q8NGL6 344 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 MMABQ96EY8 250 aaPredicted RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 DIRAS2Q96HU8 199 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 RIOK2Q9BVS4 552 aaKnown RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 RANBP3Q9H6Z4 567 aaPredicted RBP8.64□□□□□ -1.03
SNHG3-201ENST00000413987 AMBNQ9NP70 447 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 SSR3Q9UNL2 185 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 U3KQ87 197 aa8.64□□□□□ -1.03
SNHG3-201ENST00000413987 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 GON4LQ3T8J9 2241 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 WASHC1A8K0Z3 465 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 PLA2G10O15496 165 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 PIPP12273 146 aaPredicted RBP8.63□□□□□ -1.03
SNHG3-201ENST00000413987 MMP9P14780 707 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 APOBEC3AP31941 199 aaPredicted RBP8.63□□□□□ -1.03
SNHG3-201ENST00000413987 BCL6P41182 706 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 RPS14P62263 151 aaKnown RBP8.63□□□□□ -1.03
SNHG3-201ENST00000413987 VLDLRP98155 873 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 PTGR1Q14914 329 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 ABRAXAS2Q15018 415 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 VMACQ2NL98 169 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 CTSL3PQ5NE16 218 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 DDI2Q5TDH0 399 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 RNLSQ5VYX0 342 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 TRIQKQ629K1 86 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 BICRALQ6AI39 1079 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 B3GNT7Q8NFL0 401 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 OR4F6Q8NGB9 312 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 OR10Q1Q8NGQ4 319 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 AP3S1Q92572 193 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 FOXRED1Q96CU9 486 aaPredicted RBP8.63□□□□□ -1.03
SNHG3-201ENST00000413987 C4orf36Q96KX1 117 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 CCNL2Q96S94 520 aaPredicted RBP8.63□□□□□ -1.03
SNHG3-201ENST00000413987 SPATA5L1Q9BVQ7 753 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 BARHL1Q9BZE3 327 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 SYNPO2LQ9H987 977 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 FOLH1BQ9HBA9 442 aa8.63□□□□□ -1.03
SNHG3-201ENST00000413987 MKKSQ9NPJ1 570 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms