RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 HPS1Q92902 700 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 PPCDCQ96CD2 204 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 C1orf50Q9BV19 199 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 HOXD1Q9GZZ0 328 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 PIGUQ9H490 435 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 REEP4Q9H6H4 257 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 ZCCHC3Q9NUD5 404 aaKnown RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 MOKQ9UQ07 419 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 AMDHD2Q9Y303 409 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 DTNAQ9Y4J8 743 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 CAPN7Q9Y6W3 813 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 GPR171O14626 319 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 ZNF264O43296 627 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 AKAP10O43572 662 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 EIF4E2O60573 245 aaKnown RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 LILRA1O75019 489 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 SLC22A3O75751 556 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 STAMBPO95630 424 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 ALDOCP09972 364 aaKnown RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 DDX5P17844 614 aaKnown RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 CALB2P22676 271 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 RPL3P39023 403 aaKnown RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 PPOXP50336 477 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CHN2P52757 468 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CLNS1AP54105 237 aaKnown RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 ATP12AP54707 1039 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CLDN8P56748 225 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 SESN3P58005 492 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 BNIP1Q12981 228 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 SKP2Q13309 424 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CBFBQ13951 182 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 PTGR1Q14914 329 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 DPY19L1Q2PZI1 675 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 DCST2Q5T1A1 773 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 IL23RQ5VWK5 629 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CASP12Q6UXS9 341 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 DEF8Q6ZN54 512 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CCDC121Q6ZUS5 278 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 C3orf56Q8N813 242 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 ZNF614Q8N883 585 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 LINC01356Q8N9X3 169 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CLHC1Q8NHS4 586 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 PIGXQ8TBF5 258 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 SLC25A43Q8WUT9 341 aaPredicted RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 ST8SIA1Q92185 356 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 NSL1Q96IY1 281 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 TSSK3Q96PN8 268 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 SNX18Q96RF0 628 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 VRK1Q99986 396 aaPredicted RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 METTL17Q9H7H0 456 aaPredicted RBP8.32□□□□□ -1.08
RFFL-203ENST00000413582 CA10Q9NS85 328 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 BAIAP2L1Q9UHR4 511 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 KCNE3Q9Y6H6 103 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 WNK2Q9Y3S1 2297 aa8.32□□□□□ -1.08
RFFL-203ENST00000413582 CENPVL1A0A0U1RR11 272 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 BBIP1A8MTZ0 92 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 B9A039 149 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 ANKRD28O15084 1053 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 MRPL33O75394 65 aaKnown RBP8.31□□□□□ -1.08
RFFL-203ENST00000413582 PDE5AO76074 875 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 PMS2P2O95744 297 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 PRPS1L1P21108 318 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 SERPINF1P36955 418 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
RFFL-203ENST00000413582 MERTKQ12866 999 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 CYLC2Q14093 348 aaPredicted RBP8.31□□□□□ -1.08
RFFL-203ENST00000413582 EFNB3Q15768 340 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 ADIPOQQ15848 244 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 COQ5Q5HYK3 327 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 PDZK1Q5T2W1 519 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 C1QTNF12Q5T7M4 302 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 MSANTD1Q6ZTZ1 278 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 NATD1Q8N6N6 113 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 TESCQ96BS2 214 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 MTERF3Q96E29 417 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 ZHX1-C8orf76Q96EF9 292 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 ARL5BQ96KC2 179 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 ZBTB18Q99592 522 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 THUMPD3Q9BV44 507 aaKnown RBP8.31□□□□□ -1.08
RFFL-203ENST00000413582 DPY30Q9C005 99 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 C1orf21Q9H246 121 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 PLK3Q9H4B4 646 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 SLC7A10Q9NS82 523 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 ACER3Q9NUN7 267 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 SH3BP4Q9P0V3 963 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 TAGLN3Q9UI15 199 aa8.31□□□□□ -1.08
RFFL-203ENST00000413582 IGHV1-18A0A0C4DH31 117 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 SERINC4A6NH21 518 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 FAM157AC9JC47 383 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 SCAMP2O15127 329 aaKnown RBP8.3□□□□□ -1.08
RFFL-203ENST00000413582 DNPH1O43598 174 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 UBOX5O94941 541 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 NPPAP01160 153 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 IL6P05231 212 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 TFPIP10646 304 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 G6PDP11413 515 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 COX4I1P13073 169 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 DAOP14920 347 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 PGCP20142 388 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms