RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PRKYO43930 277 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 VAMP5O95183 116 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 H2AFXP16104 143 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 POLR2EP19388 210 aaKnown RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SHMT2P34897 504 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 HSPA1LP34931 641 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SLC26A3P40879 764 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 LEPP41159 167 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SLC11A1P49279 550 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 PRKXP51817 358 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SSTP61278 116 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 KRT83P78385 493 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 PITPNAQ00169 270 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 GFPT1Q06210 699 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 RAB40BQ12829 278 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 FZD2Q14332 565 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 RBMY1FQ15415 496 aaKnown RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 ATP6AP1Q15904 470 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SGCAQ16586 387 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 C11orf71Q6IPW1 123 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 HCP5Q6MZN7 132 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 FAHD2BQ6P2I3 314 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 GET4Q7L5D6 327 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 CCDC54Q8NEL0 328 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 OR52E1Q8NGJ3 308 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 OR5L2Q8NGL0 311 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 OR10G4Q8NGN3 311 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 GDAP1Q8TB36 358 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SNX21Q969T3 373 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 FAHD2AQ96GK7 314 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 WFIKKN1Q96NZ8 548 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 CCNL2Q96S94 520 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 TMEM246Q9BRR3 403 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SHANK2-AS3Q9BTD1 123 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 CRNKL1Q9BZJ0 848 aaKnown RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SELENOIQ9C0D9 397 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 DDX47Q9H0S4 455 aaKnown RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SRMSQ9H3Y6 488 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SUDS3Q9H7L9 328 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SIAEQ9HAT2 523 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SAMSN1Q9NSI8 373 aaKnown RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 QPCTLQ9NXS2 382 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 ZNF490Q9ULM2 529 aaPredicted RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 NUDCQ9Y266 331 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 MRPS33Q9Y291 106 aaKnown RBP0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 SLC25A15Q9Y619 301 aa0.29□□□□□ -2.36
RNU2-55P-201ENST00000411146 VWDEQ8N2E2 1590 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 ZNF469Q96JG9 3925 aaPredicted RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 NSG1A0A0A6YYJ2 146 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 IGHV2-70DA0A0C4DH43 119 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 H0YHG0 523 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 DNASE2O00115 360 aaPredicted RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 PEX7O00628 323 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 GLAP06280 429 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 CLUP10909 449 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 CALB2P22676 271 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 SOX6P35712 828 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 KIR2DS4P43632 304 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 ASMTP46597 345 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 NCBP2P52298 156 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 ATXN3P54252 364 aaPredicted RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 RAP1AP62834 184 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 EWSR1Q01844 656 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 SMARCB1Q12824 385 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 TSTA3Q13630 321 aaPredicted RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 PARP10Q53GL7 1025 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 OR2G6Q5TZ20 316 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 C12orf60Q5U649 245 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 TIGD3Q6B0B8 471 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 KDM7AQ6ZMT4 941 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 WDR88Q6ZMY6 472 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 APTXQ7Z2E3 356 aaKnown RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 SLC26A11Q86WA9 606 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 ZNF664Q8N3J9 261 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 CCNYQ8ND76 341 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 OR4K14Q8NGD5 310 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 NANPQ8TBE9 248 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 PTP4A1Q93096 173 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 EXOSC8Q96B26 276 aaKnown RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 L3HYPDHQ96EM0 354 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 FTHL17Q9BXU8 183 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 NAT10Q9H0A0 1025 aaKnown RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 RHBGQ9H310 441 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 RPP21Q9H633 154 aaKnown RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 FOLH1BQ9HBA9 442 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 HOMER3Q9NSC5 361 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 MRPL39Q9NYK5 338 aaKnown RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 ZNRD1Q9P1U0 126 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 DNPEPQ9ULA0 475 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 AP4B1Q9Y6B7 739 aa0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 RP1L1Q8IWN7 2480 aaPredicted RBP0.28□□□□□ -2.36
RNU2-55P-201ENST00000411146 CUX2O14529 1486 aa0.28□□□□□ -2.37
RNU2-55P-201ENST00000411146 ADGRL1O94910 1474 aa0.28□□□□□ -2.37
RNU2-55P-201ENST00000411146 PRR14LQ5THK1 2151 aa0.28□□□□□ -2.37
RNU2-55P-201ENST00000411146 NACADO15069 1562 aa0.28□□□□□ -2.37
RNU2-55P-201ENST00000411146 FBN2P35556 2912 aa0.27□□□□□ -2.37
RNU2-55P-201ENST00000411146 IGHV3-66A0A0C4DH42 116 aa0.27□□□□□ -2.37
RNU2-55P-201ENST00000411146 A0A0U1RQG5 324 aaPredicted RBP0.27□□□□□ -2.37
RNU2-55P-201ENST00000411146 C12orf77C9JDV5 145 aa0.27□□□□□ -2.37
RNU2-55P-201ENST00000411146 INS-IGF2F8WCM5 200 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms